Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CMSS1Q9BQ75 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CMSS1Q9BQ75 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CMSS1Q9BQ75 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CMSS1Q9BQ75 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.98■□□□□ 0.47
CMSS1Q9BQ75 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.98■□□□□ 0.47
CMSS1Q9BQ75 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CMSS1Q9BQ75 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CMSS1Q9BQ75 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CMSS1Q9BQ75 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CMSS1Q9BQ75 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CMSS1Q9BQ75 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CMSS1Q9BQ75 AC010141.3-201ENST00000456659 717 ntBASIC17.98■□□□□ 0.47
CMSS1Q9BQ75 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CMSS1Q9BQ75 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CMSS1Q9BQ75 MIR3181-201ENST00000578512 73 ntBASIC17.98■□□□□ 0.47
CMSS1Q9BQ75 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.98■□□□□ 0.47
CMSS1Q9BQ75 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.98■□□□□ 0.47
CMSS1Q9BQ75 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CMSS1Q9BQ75 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CMSS1Q9BQ75 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CMSS1Q9BQ75 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CMSS1Q9BQ75 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CMSS1Q9BQ75 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CMSS1Q9BQ75 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CMSS1Q9BQ75 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CMSS1Q9BQ75 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.97■□□□□ 0.47
CMSS1Q9BQ75 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CMSS1Q9BQ75 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CMSS1Q9BQ75 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CMSS1Q9BQ75 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CMSS1Q9BQ75 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.97■□□□□ 0.47
CMSS1Q9BQ75 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CMSS1Q9BQ75 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.96■□□□□ 0.47
CMSS1Q9BQ75 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CMSS1Q9BQ75 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CMSS1Q9BQ75 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CMSS1Q9BQ75 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
CMSS1Q9BQ75 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CMSS1Q9BQ75 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CMSS1Q9BQ75 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.96■□□□□ 0.47
CMSS1Q9BQ75 AC092171.4-201ENST00000609130 632 ntBASIC17.96■□□□□ 0.47
CMSS1Q9BQ75 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CMSS1Q9BQ75 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.96■□□□□ 0.47
CMSS1Q9BQ75 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CMSS1Q9BQ75 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CMSS1Q9BQ75 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CMSS1Q9BQ75 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CMSS1Q9BQ75 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.96■□□□□ 0.47
CMSS1Q9BQ75 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CMSS1Q9BQ75 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CMSS1Q9BQ75 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CMSS1Q9BQ75 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CMSS1Q9BQ75 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CMSS1Q9BQ75 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CMSS1Q9BQ75 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CMSS1Q9BQ75 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.95■□□□□ 0.46
CMSS1Q9BQ75 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.95■□□□□ 0.46
CMSS1Q9BQ75 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CMSS1Q9BQ75 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CMSS1Q9BQ75 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CMSS1Q9BQ75 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CMSS1Q9BQ75 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CMSS1Q9BQ75 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CMSS1Q9BQ75 OR2A1-AS1-204ENST00000470435 602 ntBASIC17.95■□□□□ 0.46
CMSS1Q9BQ75 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CMSS1Q9BQ75 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC17.95■□□□□ 0.46
CMSS1Q9BQ75 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.95■□□□□ 0.46
CMSS1Q9BQ75 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC17.95■□□□□ 0.46
CMSS1Q9BQ75 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CMSS1Q9BQ75 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.95■□□□□ 0.46
CMSS1Q9BQ75 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CMSS1Q9BQ75 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.95■□□□□ 0.46
CMSS1Q9BQ75 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CMSS1Q9BQ75 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.95■□□□□ 0.46
CMSS1Q9BQ75 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.95■□□□□ 0.46
CMSS1Q9BQ75 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CMSS1Q9BQ75 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CMSS1Q9BQ75 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.94■□□□□ 0.46
CMSS1Q9BQ75 OXCT2P1-201ENST00000447263 1535 ntBASIC17.94■□□□□ 0.46
CMSS1Q9BQ75 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CMSS1Q9BQ75 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.94■□□□□ 0.46
CMSS1Q9BQ75 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CMSS1Q9BQ75 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CMSS1Q9BQ75 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CMSS1Q9BQ75 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CMSS1Q9BQ75 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CMSS1Q9BQ75 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CMSS1Q9BQ75 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CMSS1Q9BQ75 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CMSS1Q9BQ75 SRD5A1P1-201ENST00000442297 786 ntBASIC17.94■□□□□ 0.46
CMSS1Q9BQ75 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CMSS1Q9BQ75 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.94■□□□□ 0.46
CMSS1Q9BQ75 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CMSS1Q9BQ75 AL034346.1-201ENST00000568244 1277 ntBASIC17.94■□□□□ 0.46
CMSS1Q9BQ75 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CMSS1Q9BQ75 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.94■□□□□ 0.46
CMSS1Q9BQ75 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.94■□□□□ 0.46
CMSS1Q9BQ75 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CMSS1Q9BQ75 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms