Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
FOXC2Q99958 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
FOXC2Q99958 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.87■□□□□ 0.45
FOXC2Q99958 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.87■□□□□ 0.45
FOXC2Q99958 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.87■□□□□ 0.45
FOXC2Q99958 AC008403.3-201ENST00000598924 454 ntBASIC17.87■□□□□ 0.45
FOXC2Q99958 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXC2Q99958 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
FOXC2Q99958 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
FOXC2Q99958 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXC2Q99958 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
FOXC2Q99958 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.87■□□□□ 0.45
FOXC2Q99958 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXC2Q99958 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
FOXC2Q99958 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXC2Q99958 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXC2Q99958 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
FOXC2Q99958 POU5F1P4-201ENST00000413175 1085 ntBASIC17.86■□□□□ 0.45
FOXC2Q99958 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.86■□□□□ 0.45
FOXC2Q99958 SNORA78-201ENST00000459373 127 ntBASIC17.86■□□□□ 0.45
FOXC2Q99958 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.86■□□□□ 0.45
FOXC2Q99958 C1QBPP2-201ENST00000528754 825 ntBASIC17.86■□□□□ 0.45
FOXC2Q99958 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.86■□□□□ 0.45
FOXC2Q99958 AC060766.5-201ENST00000590539 871 ntBASIC17.86■□□□□ 0.45
FOXC2Q99958 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
FOXC2Q99958 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
FOXC2Q99958 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXC2Q99958 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
FOXC2Q99958 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC17.86■□□□□ 0.45
FOXC2Q99958 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
FOXC2Q99958 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
FOXC2Q99958 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXC2Q99958 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
FOXC2Q99958 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC17.85■□□□□ 0.45
FOXC2Q99958 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.85■□□□□ 0.45
FOXC2Q99958 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.85■□□□□ 0.45
FOXC2Q99958 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
FOXC2Q99958 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.85■□□□□ 0.45
FOXC2Q99958 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
FOXC2Q99958 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
FOXC2Q99958 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.85■□□□□ 0.45
FOXC2Q99958 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.85■□□□□ 0.45
FOXC2Q99958 LINC00543-201ENST00000567234 1845 ntBASIC17.85■□□□□ 0.45
FOXC2Q99958 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.85■□□□□ 0.45
FOXC2Q99958 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.85■□□□□ 0.45
FOXC2Q99958 CYP2T3P-201ENST00000601990 817 ntBASIC17.85■□□□□ 0.45
FOXC2Q99958 Z99916.2-201ENST00000604037 246 ntBASIC17.85■□□□□ 0.45
FOXC2Q99958 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXC2Q99958 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
FOXC2Q99958 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXC2Q99958 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC17.84■□□□□ 0.45
FOXC2Q99958 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXC2Q99958 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.84■□□□□ 0.45
FOXC2Q99958 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXC2Q99958 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.84■□□□□ 0.45
FOXC2Q99958 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.84■□□□□ 0.45
FOXC2Q99958 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.84■□□□□ 0.45
FOXC2Q99958 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXC2Q99958 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXC2Q99958 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXC2Q99958 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
FOXC2Q99958 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.84■□□□□ 0.45
FOXC2Q99958 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXC2Q99958 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
FOXC2Q99958 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.84■□□□□ 0.45
FOXC2Q99958 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.84■□□□□ 0.45
FOXC2Q99958 HLA-B-256ENST00000639848 1089 ntBASIC17.84■□□□□ 0.45
FOXC2Q99958 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
FOXC2Q99958 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXC2Q99958 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
FOXC2Q99958 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.83■□□□□ 0.45
FOXC2Q99958 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
FOXC2Q99958 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.83■□□□□ 0.44
FOXC2Q99958 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.83■□□□□ 0.44
FOXC2Q99958 KRT17P3-201ENST00000420566 1262 ntBASIC17.83■□□□□ 0.44
FOXC2Q99958 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
FOXC2Q99958 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.83■□□□□ 0.44
FOXC2Q99958 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.83■□□□□ 0.44
FOXC2Q99958 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
FOXC2Q99958 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.83■□□□□ 0.44
FOXC2Q99958 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.83■□□□□ 0.44
FOXC2Q99958 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.83■□□□□ 0.44
FOXC2Q99958 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
FOXC2Q99958 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
FOXC2Q99958 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FOXC2Q99958 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXC2Q99958 RBM17P2-201ENST00000616397 1405 ntBASIC17.82■□□□□ 0.44
FOXC2Q99958 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXC2Q99958 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
FOXC2Q99958 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.82■□□□□ 0.44
FOXC2Q99958 KRT18P21-201ENST00000515767 1272 ntBASIC17.82■□□□□ 0.44
FOXC2Q99958 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FOXC2Q99958 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.82■□□□□ 0.44
FOXC2Q99958 AC243732.1-201ENST00000612648 864 ntBASIC17.82■□□□□ 0.44
FOXC2Q99958 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXC2Q99958 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXC2Q99958 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXC2Q99958 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXC2Q99958 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXC2Q99958 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms