Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
NECTIN4Q96NY8 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC22.05■■□□□ 1.12
NECTIN4Q96NY8 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
NECTIN4Q96NY8 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC22.04■■□□□ 1.12
NECTIN4Q96NY8 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
NECTIN4Q96NY8 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
NECTIN4Q96NY8 MIR718-201ENST00000390190 70 ntBASIC22.04■■□□□ 1.12
NECTIN4Q96NY8 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC22.04■■□□□ 1.12
NECTIN4Q96NY8 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC22.04■■□□□ 1.12
NECTIN4Q96NY8 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
NECTIN4Q96NY8 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
NECTIN4Q96NY8 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
NECTIN4Q96NY8 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
NECTIN4Q96NY8 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
NECTIN4Q96NY8 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
NECTIN4Q96NY8 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC22.04■■□□□ 1.12
NECTIN4Q96NY8 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC22.03■■□□□ 1.12
NECTIN4Q96NY8 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
NECTIN4Q96NY8 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
NECTIN4Q96NY8 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC22.03■■□□□ 1.12
NECTIN4Q96NY8 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
NECTIN4Q96NY8 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC22.03■■□□□ 1.12
NECTIN4Q96NY8 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
NECTIN4Q96NY8 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC22.03■■□□□ 1.12
NECTIN4Q96NY8 MME-217ENST00000616757 1315 ntTSL 5 BASIC22.03■■□□□ 1.12
NECTIN4Q96NY8 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
NECTIN4Q96NY8 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.03■■□□□ 1.12
NECTIN4Q96NY8 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
NECTIN4Q96NY8 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
NECTIN4Q96NY8 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
NECTIN4Q96NY8 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
NECTIN4Q96NY8 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
NECTIN4Q96NY8 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC22.02■■□□□ 1.12
NECTIN4Q96NY8 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC22.02■■□□□ 1.12
NECTIN4Q96NY8 PEX7-202ENST00000367756 680 ntTSL 3 BASIC22.02■■□□□ 1.12
NECTIN4Q96NY8 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC22.02■■□□□ 1.12
NECTIN4Q96NY8 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC22.02■■□□□ 1.12
NECTIN4Q96NY8 GATS-209ENST00000454084 1030 ntTSL 3 BASIC22.02■■□□□ 1.12
NECTIN4Q96NY8 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC22.02■■□□□ 1.12
NECTIN4Q96NY8 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
NECTIN4Q96NY8 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC22.02■■□□□ 1.12
NECTIN4Q96NY8 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
NECTIN4Q96NY8 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.02■■□□□ 1.12
NECTIN4Q96NY8 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.02■■□□□ 1.12
NECTIN4Q96NY8 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
NECTIN4Q96NY8 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
NECTIN4Q96NY8 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
NECTIN4Q96NY8 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
NECTIN4Q96NY8 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
NECTIN4Q96NY8 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
NECTIN4Q96NY8 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
NECTIN4Q96NY8 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
NECTIN4Q96NY8 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
NECTIN4Q96NY8 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC22.01■■□□□ 1.11
NECTIN4Q96NY8 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC22.01■■□□□ 1.11
NECTIN4Q96NY8 RHOD-202ENST00000532559 538 ntTSL 3 BASIC22.01■■□□□ 1.11
NECTIN4Q96NY8 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC22.01■■□□□ 1.11
NECTIN4Q96NY8 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC22.01■■□□□ 1.11
NECTIN4Q96NY8 AL359736.2-201ENST00000621992 437 ntBASIC22.01■■□□□ 1.11
NECTIN4Q96NY8 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
NECTIN4Q96NY8 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.01■■□□□ 1.11
NECTIN4Q96NY8 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC22.01■■□□□ 1.11
NECTIN4Q96NY8 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.01■■□□□ 1.11
NECTIN4Q96NY8 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
NECTIN4Q96NY8 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
NECTIN4Q96NY8 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
NECTIN4Q96NY8 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
NECTIN4Q96NY8 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC22■■□□□ 1.11
NECTIN4Q96NY8 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC22■■□□□ 1.11
NECTIN4Q96NY8 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC22■■□□□ 1.11
NECTIN4Q96NY8 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
NECTIN4Q96NY8 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC22■■□□□ 1.11
NECTIN4Q96NY8 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22■■□□□ 1.11
NECTIN4Q96NY8 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
NECTIN4Q96NY8 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
NECTIN4Q96NY8 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
NECTIN4Q96NY8 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
NECTIN4Q96NY8 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
NECTIN4Q96NY8 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
NECTIN4Q96NY8 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
NECTIN4Q96NY8 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
NECTIN4Q96NY8 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
NECTIN4Q96NY8 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.99■■□□□ 1.11
NECTIN4Q96NY8 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.99■■□□□ 1.11
NECTIN4Q96NY8 AC060766.5-201ENST00000590539 871 ntBASIC21.99■■□□□ 1.11
NECTIN4Q96NY8 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.99■■□□□ 1.11
NECTIN4Q96NY8 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NECTIN4Q96NY8 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.99■■□□□ 1.11
NECTIN4Q96NY8 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
NECTIN4Q96NY8 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.98■■□□□ 1.11
NECTIN4Q96NY8 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NECTIN4Q96NY8 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
NECTIN4Q96NY8 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
NECTIN4Q96NY8 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NECTIN4Q96NY8 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NECTIN4Q96NY8 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.98■■□□□ 1.11
NECTIN4Q96NY8 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.98■■□□□ 1.11
NECTIN4Q96NY8 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.98■■□□□ 1.11
NECTIN4Q96NY8 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
NECTIN4Q96NY8 HLA-B-256ENST00000639848 1089 ntBASIC21.98■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms