Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SMIM4Q8WVI0 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SMIM4Q8WVI0 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SMIM4Q8WVI0 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
SMIM4Q8WVI0 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SMIM4Q8WVI0 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SMIM4Q8WVI0 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SMIM4Q8WVI0 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.08■□□□□ 0.48
SMIM4Q8WVI0 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
SMIM4Q8WVI0 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.07■□□□□ 0.48
SMIM4Q8WVI0 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMIM4Q8WVI0 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SMIM4Q8WVI0 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMIM4Q8WVI0 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
SMIM4Q8WVI0 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMIM4Q8WVI0 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMIM4Q8WVI0 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.07■□□□□ 0.48
SMIM4Q8WVI0 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.07■□□□□ 0.48
SMIM4Q8WVI0 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMIM4Q8WVI0 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMIM4Q8WVI0 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
SMIM4Q8WVI0 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.07■□□□□ 0.48
SMIM4Q8WVI0 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMIM4Q8WVI0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.07■□□□□ 0.48
SMIM4Q8WVI0 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SMIM4Q8WVI0 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SMIM4Q8WVI0 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SMIM4Q8WVI0 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SMIM4Q8WVI0 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SMIM4Q8WVI0 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SMIM4Q8WVI0 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SMIM4Q8WVI0 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SMIM4Q8WVI0 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
SMIM4Q8WVI0 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.06■□□□□ 0.48
SMIM4Q8WVI0 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SMIM4Q8WVI0 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.05■□□□□ 0.48
SMIM4Q8WVI0 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SMIM4Q8WVI0 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SMIM4Q8WVI0 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SMIM4Q8WVI0 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SMIM4Q8WVI0 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SMIM4Q8WVI0 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SMIM4Q8WVI0 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.05■□□□□ 0.48
SMIM4Q8WVI0 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SMIM4Q8WVI0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SMIM4Q8WVI0 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SMIM4Q8WVI0 PLK5-205ENST00000642079 1969 ntBASIC18.05■□□□□ 0.48
SMIM4Q8WVI0 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.05■□□□□ 0.48
SMIM4Q8WVI0 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC18.05■□□□□ 0.48
SMIM4Q8WVI0 AL499627.2-201ENST00000606283 725 ntBASIC18.05■□□□□ 0.48
SMIM4Q8WVI0 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SMIM4Q8WVI0 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
SMIM4Q8WVI0 AC009102.2-201ENST00000606772 1639 ntBASIC18.05■□□□□ 0.48
SMIM4Q8WVI0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SMIM4Q8WVI0 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.05■□□□□ 0.48
SMIM4Q8WVI0 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SMIM4Q8WVI0 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SMIM4Q8WVI0 AC027702.1-201ENST00000563810 1770 ntBASIC18.04■□□□□ 0.48
SMIM4Q8WVI0 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.04■□□□□ 0.48
SMIM4Q8WVI0 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
SMIM4Q8WVI0 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.04■□□□□ 0.48
SMIM4Q8WVI0 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.04■□□□□ 0.48
SMIM4Q8WVI0 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
SMIM4Q8WVI0 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SMIM4Q8WVI0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SMIM4Q8WVI0 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC18.04■□□□□ 0.48
SMIM4Q8WVI0 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SMIM4Q8WVI0 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
SMIM4Q8WVI0 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SMIM4Q8WVI0 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
SMIM4Q8WVI0 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SMIM4Q8WVI0 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SMIM4Q8WVI0 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
SMIM4Q8WVI0 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SMIM4Q8WVI0 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SMIM4Q8WVI0 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SMIM4Q8WVI0 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMIM4Q8WVI0 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMIM4Q8WVI0 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
SMIM4Q8WVI0 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
SMIM4Q8WVI0 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMIM4Q8WVI0 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SMIM4Q8WVI0 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SMIM4Q8WVI0 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
SMIM4Q8WVI0 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMIM4Q8WVI0 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.03■□□□□ 0.48
SMIM4Q8WVI0 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.03■□□□□ 0.48
SMIM4Q8WVI0 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMIM4Q8WVI0 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMIM4Q8WVI0 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMIM4Q8WVI0 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMIM4Q8WVI0 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMIM4Q8WVI0 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
SMIM4Q8WVI0 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
SMIM4Q8WVI0 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SMIM4Q8WVI0 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMIM4Q8WVI0 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMIM4Q8WVI0 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.03■□□□□ 0.48
SMIM4Q8WVI0 AC087289.5-201ENST00000586076 3175 ntBASIC18.03■□□□□ 0.48
SMIM4Q8WVI0 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms