Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RPS4Y2Q8TD47 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPS4Y2Q8TD47 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPS4Y2Q8TD47 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPS4Y2Q8TD47 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPS4Y2Q8TD47 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.51■□□□□ 0.55
RPS4Y2Q8TD47 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.51■□□□□ 0.55
RPS4Y2Q8TD47 AP006587.3-201ENST00000525742 1516 ntBASIC18.51■□□□□ 0.55
RPS4Y2Q8TD47 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
RPS4Y2Q8TD47 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RPS4Y2Q8TD47 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RPS4Y2Q8TD47 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.51■□□□□ 0.55
RPS4Y2Q8TD47 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.51■□□□□ 0.55
RPS4Y2Q8TD47 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPS4Y2Q8TD47 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPS4Y2Q8TD47 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RPS4Y2Q8TD47 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
RPS4Y2Q8TD47 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPS4Y2Q8TD47 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RPS4Y2Q8TD47 AC006128.1-201ENST00000624704 1661 ntBASIC18.5■□□□□ 0.55
RPS4Y2Q8TD47 AC092667.1-201ENST00000434301 2586 ntBASIC18.5■□□□□ 0.55
RPS4Y2Q8TD47 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPS4Y2Q8TD47 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.5■□□□□ 0.55
RPS4Y2Q8TD47 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RPS4Y2Q8TD47 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.5■□□□□ 0.55
RPS4Y2Q8TD47 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.5■□□□□ 0.55
RPS4Y2Q8TD47 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RPS4Y2Q8TD47 MIR3621-201ENST00000580529 85 ntBASIC18.5■□□□□ 0.55
RPS4Y2Q8TD47 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RPS4Y2Q8TD47 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.5■□□□□ 0.55
RPS4Y2Q8TD47 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPS4Y2Q8TD47 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.5■□□□□ 0.55
RPS4Y2Q8TD47 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPS4Y2Q8TD47 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPS4Y2Q8TD47 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPS4Y2Q8TD47 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RPS4Y2Q8TD47 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
RPS4Y2Q8TD47 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.49■□□□□ 0.55
RPS4Y2Q8TD47 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPS4Y2Q8TD47 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.49■□□□□ 0.55
RPS4Y2Q8TD47 AP005435.1-201ENST00000529293 1178 ntBASIC18.49■□□□□ 0.55
RPS4Y2Q8TD47 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
RPS4Y2Q8TD47 AL356740.2-201ENST00000601559 647 ntBASIC18.49■□□□□ 0.55
RPS4Y2Q8TD47 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.49■□□□□ 0.55
RPS4Y2Q8TD47 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.49■□□□□ 0.55
RPS4Y2Q8TD47 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
RPS4Y2Q8TD47 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.49■□□□□ 0.55
RPS4Y2Q8TD47 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RPS4Y2Q8TD47 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RPS4Y2Q8TD47 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPS4Y2Q8TD47 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPS4Y2Q8TD47 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
RPS4Y2Q8TD47 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.49■□□□□ 0.55
RPS4Y2Q8TD47 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.49■□□□□ 0.55
RPS4Y2Q8TD47 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.49■□□□□ 0.55
RPS4Y2Q8TD47 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RPS4Y2Q8TD47 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPS4Y2Q8TD47 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RPS4Y2Q8TD47 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPS4Y2Q8TD47 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.48■□□□□ 0.55
RPS4Y2Q8TD47 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPS4Y2Q8TD47 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPS4Y2Q8TD47 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPS4Y2Q8TD47 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
RPS4Y2Q8TD47 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPS4Y2Q8TD47 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPS4Y2Q8TD47 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.48■□□□□ 0.55
RPS4Y2Q8TD47 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.48■□□□□ 0.55
RPS4Y2Q8TD47 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.48■□□□□ 0.55
RPS4Y2Q8TD47 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
RPS4Y2Q8TD47 AC092171.4-201ENST00000609130 632 ntBASIC18.48■□□□□ 0.55
RPS4Y2Q8TD47 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPS4Y2Q8TD47 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RPS4Y2Q8TD47 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPS4Y2Q8TD47 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPS4Y2Q8TD47 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.48■□□□□ 0.55
RPS4Y2Q8TD47 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RPS4Y2Q8TD47 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.48■□□□□ 0.55
RPS4Y2Q8TD47 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPS4Y2Q8TD47 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
RPS4Y2Q8TD47 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.47■□□□□ 0.55
RPS4Y2Q8TD47 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPS4Y2Q8TD47 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPS4Y2Q8TD47 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RPS4Y2Q8TD47 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPS4Y2Q8TD47 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RPS4Y2Q8TD47 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPS4Y2Q8TD47 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RPS4Y2Q8TD47 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RPS4Y2Q8TD47 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RPS4Y2Q8TD47 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPS4Y2Q8TD47 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.47■□□□□ 0.55
RPS4Y2Q8TD47 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.47■□□□□ 0.55
RPS4Y2Q8TD47 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
RPS4Y2Q8TD47 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.47■□□□□ 0.55
RPS4Y2Q8TD47 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
RPS4Y2Q8TD47 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPS4Y2Q8TD47 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPS4Y2Q8TD47 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPS4Y2Q8TD47 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms