Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NUP43Q8NFH3 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.78■□□□□ 0.76
NUP43Q8NFH3 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NUP43Q8NFH3 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NUP43Q8NFH3 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.78■□□□□ 0.76
NUP43Q8NFH3 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.78■□□□□ 0.76
NUP43Q8NFH3 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.78■□□□□ 0.76
NUP43Q8NFH3 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.78■□□□□ 0.76
NUP43Q8NFH3 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.78■□□□□ 0.76
NUP43Q8NFH3 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.78■□□□□ 0.76
NUP43Q8NFH3 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.78■□□□□ 0.76
NUP43Q8NFH3 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.78■□□□□ 0.76
NUP43Q8NFH3 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NUP43Q8NFH3 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.78■□□□□ 0.76
NUP43Q8NFH3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NUP43Q8NFH3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
NUP43Q8NFH3 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.77■□□□□ 0.76
NUP43Q8NFH3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NUP43Q8NFH3 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
NUP43Q8NFH3 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
NUP43Q8NFH3 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NUP43Q8NFH3 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.77■□□□□ 0.76
NUP43Q8NFH3 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.77■□□□□ 0.76
NUP43Q8NFH3 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.77■□□□□ 0.76
NUP43Q8NFH3 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NUP43Q8NFH3 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.77■□□□□ 0.76
NUP43Q8NFH3 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
NUP43Q8NFH3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.77■□□□□ 0.76
NUP43Q8NFH3 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.77■□□□□ 0.76
NUP43Q8NFH3 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.77■□□□□ 0.76
NUP43Q8NFH3 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NUP43Q8NFH3 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.77■□□□□ 0.75
NUP43Q8NFH3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
NUP43Q8NFH3 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NUP43Q8NFH3 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
NUP43Q8NFH3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
NUP43Q8NFH3 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NUP43Q8NFH3 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NUP43Q8NFH3 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NUP43Q8NFH3 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NUP43Q8NFH3 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NUP43Q8NFH3 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NUP43Q8NFH3 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NUP43Q8NFH3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NUP43Q8NFH3 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.76■□□□□ 0.75
NUP43Q8NFH3 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.76■□□□□ 0.75
NUP43Q8NFH3 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NUP43Q8NFH3 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NUP43Q8NFH3 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NUP43Q8NFH3 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.76■□□□□ 0.75
NUP43Q8NFH3 MIR6084-201ENST00000622012 110 ntBASIC19.76■□□□□ 0.75
NUP43Q8NFH3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
NUP43Q8NFH3 AF106564.1-201ENST00000607058 2553 ntBASIC19.76■□□□□ 0.75
NUP43Q8NFH3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NUP43Q8NFH3 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NUP43Q8NFH3 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NUP43Q8NFH3 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NUP43Q8NFH3 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NUP43Q8NFH3 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.75■□□□□ 0.75
NUP43Q8NFH3 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
NUP43Q8NFH3 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NUP43Q8NFH3 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NUP43Q8NFH3 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.75■□□□□ 0.75
NUP43Q8NFH3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NUP43Q8NFH3 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.75■□□□□ 0.75
NUP43Q8NFH3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
NUP43Q8NFH3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUP43Q8NFH3 AL024507.2-201ENST00000606070 2574 ntBASIC19.74■□□□□ 0.75
NUP43Q8NFH3 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUP43Q8NFH3 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
NUP43Q8NFH3 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NUP43Q8NFH3 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUP43Q8NFH3 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.74■□□□□ 0.75
NUP43Q8NFH3 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.74■□□□□ 0.75
NUP43Q8NFH3 TPRG1LP1-201ENST00000598702 760 ntBASIC19.74■□□□□ 0.75
NUP43Q8NFH3 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUP43Q8NFH3 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.74■□□□□ 0.75
NUP43Q8NFH3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUP43Q8NFH3 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.74■□□□□ 0.75
NUP43Q8NFH3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUP43Q8NFH3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUP43Q8NFH3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.74■□□□□ 0.75
NUP43Q8NFH3 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUP43Q8NFH3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.74■□□□□ 0.75
NUP43Q8NFH3 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUP43Q8NFH3 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
NUP43Q8NFH3 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NUP43Q8NFH3 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NUP43Q8NFH3 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.73■□□□□ 0.75
NUP43Q8NFH3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
NUP43Q8NFH3 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
NUP43Q8NFH3 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.73■□□□□ 0.75
NUP43Q8NFH3 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NUP43Q8NFH3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.73■□□□□ 0.75
NUP43Q8NFH3 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NUP43Q8NFH3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.73■□□□□ 0.75
NUP43Q8NFH3 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
NUP43Q8NFH3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.73■□□□□ 0.75
NUP43Q8NFH3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.73■□□□□ 0.75
NUP43Q8NFH3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms