Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.17■□□□□ 0.98
RAPH1Q70E73 AP005435.1-201ENST00000529293 1178 ntBASIC21.17■□□□□ 0.98
RAPH1Q70E73 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.17■□□□□ 0.98
RAPH1Q70E73 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
RAPH1Q70E73 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
RAPH1Q70E73 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RAPH1Q70E73 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAPH1Q70E73 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAPH1Q70E73 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.16■□□□□ 0.98
RAPH1Q70E73 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAPH1Q70E73 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAPH1Q70E73 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.16■□□□□ 0.98
RAPH1Q70E73 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAPH1Q70E73 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.16■□□□□ 0.98
RAPH1Q70E73 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAPH1Q70E73 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAPH1Q70E73 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
RAPH1Q70E73 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RAPH1Q70E73 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RAPH1Q70E73 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.16■□□□□ 0.98
RAPH1Q70E73 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAPH1Q70E73 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.16■□□□□ 0.98
RAPH1Q70E73 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAPH1Q70E73 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.16■□□□□ 0.98
RAPH1Q70E73 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAPH1Q70E73 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAPH1Q70E73 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RAPH1Q70E73 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAPH1Q70E73 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAPH1Q70E73 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAPH1Q70E73 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.15■□□□□ 0.98
RAPH1Q70E73 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
RAPH1Q70E73 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.15■□□□□ 0.98
RAPH1Q70E73 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.15■□□□□ 0.98
RAPH1Q70E73 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.15■□□□□ 0.98
RAPH1Q70E73 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RAPH1Q70E73 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.15■□□□□ 0.98
RAPH1Q70E73 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
RAPH1Q70E73 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.14■□□□□ 0.98
RAPH1Q70E73 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RAPH1Q70E73 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
RAPH1Q70E73 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RAPH1Q70E73 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RAPH1Q70E73 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RAPH1Q70E73 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RAPH1Q70E73 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RAPH1Q70E73 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
RAPH1Q70E73 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAPH1Q70E73 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.14■□□□□ 0.97
RAPH1Q70E73 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
RAPH1Q70E73 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAPH1Q70E73 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.14■□□□□ 0.97
RAPH1Q70E73 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAPH1Q70E73 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RAPH1Q70E73 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RAPH1Q70E73 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAPH1Q70E73 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
RAPH1Q70E73 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.13■□□□□ 0.97
RAPH1Q70E73 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.13■□□□□ 0.97
RAPH1Q70E73 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAPH1Q70E73 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
RAPH1Q70E73 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.13■□□□□ 0.97
RAPH1Q70E73 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAPH1Q70E73 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
RAPH1Q70E73 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAPH1Q70E73 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.13■□□□□ 0.97
RAPH1Q70E73 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
RAPH1Q70E73 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAPH1Q70E73 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
RAPH1Q70E73 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAPH1Q70E73 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAPH1Q70E73 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RAPH1Q70E73 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RAPH1Q70E73 AC003102.1-202ENST00000563394 1796 ntBASIC21.12■□□□□ 0.97
RAPH1Q70E73 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAPH1Q70E73 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.12■□□□□ 0.97
RAPH1Q70E73 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RAPH1Q70E73 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RAPH1Q70E73 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.12■□□□□ 0.97
RAPH1Q70E73 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAPH1Q70E73 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAPH1Q70E73 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RAPH1Q70E73 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
RAPH1Q70E73 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RAPH1Q70E73 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.11■□□□□ 0.97
RAPH1Q70E73 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.11■□□□□ 0.97
RAPH1Q70E73 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
RAPH1Q70E73 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RAPH1Q70E73 AL136116.3-201ENST00000402907 1138 ntBASIC21.11■□□□□ 0.97
RAPH1Q70E73 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.11■□□□□ 0.97
RAPH1Q70E73 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RAPH1Q70E73 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
RAPH1Q70E73 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
RAPH1Q70E73 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
RAPH1Q70E73 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RAPH1Q70E73 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.11■□□□□ 0.97
RAPH1Q70E73 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RAPH1Q70E73 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RAPH1Q70E73 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RAPH1Q70E73 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms