Protein–RNA interactions for Protein: Q53FP2

TMEM35A, Transmembrane protein 35A, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35AQ53FP2 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.13■□□□□ 0.81
TMEM35AQ53FP2 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.13■□□□□ 0.81
TMEM35AQ53FP2 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM35AQ53FP2 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.13■□□□□ 0.81
TMEM35AQ53FP2 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.13■□□□□ 0.81
TMEM35AQ53FP2 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM35AQ53FP2 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM35AQ53FP2 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM35AQ53FP2 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM35AQ53FP2 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM35AQ53FP2 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
TMEM35AQ53FP2 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM35AQ53FP2 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
TMEM35AQ53FP2 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TMEM35AQ53FP2 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TMEM35AQ53FP2 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.12■□□□□ 0.81
TMEM35AQ53FP2 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TMEM35AQ53FP2 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TMEM35AQ53FP2 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TMEM35AQ53FP2 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.12■□□□□ 0.81
TMEM35AQ53FP2 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.12■□□□□ 0.81
TMEM35AQ53FP2 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.12■□□□□ 0.81
TMEM35AQ53FP2 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.12■□□□□ 0.81
TMEM35AQ53FP2 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TMEM35AQ53FP2 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TMEM35AQ53FP2 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TMEM35AQ53FP2 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMEM35AQ53FP2 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMEM35AQ53FP2 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TMEM35AQ53FP2 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.11■□□□□ 0.81
TMEM35AQ53FP2 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.11■□□□□ 0.81
TMEM35AQ53FP2 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TMEM35AQ53FP2 PKD1P6-201ENST00000343738 4769 ntBASIC20.11■□□□□ 0.81
TMEM35AQ53FP2 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.11■□□□□ 0.81
TMEM35AQ53FP2 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMEM35AQ53FP2 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMEM35AQ53FP2 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
TMEM35AQ53FP2 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.11■□□□□ 0.81
TMEM35AQ53FP2 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.11■□□□□ 0.81
TMEM35AQ53FP2 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.11■□□□□ 0.81
TMEM35AQ53FP2 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.11■□□□□ 0.81
TMEM35AQ53FP2 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TMEM35AQ53FP2 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMEM35AQ53FP2 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMEM35AQ53FP2 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMEM35AQ53FP2 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMEM35AQ53FP2 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TMEM35AQ53FP2 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TMEM35AQ53FP2 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TMEM35AQ53FP2 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.1■□□□□ 0.81
TMEM35AQ53FP2 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TMEM35AQ53FP2 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.1■□□□□ 0.81
TMEM35AQ53FP2 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TMEM35AQ53FP2 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.1■□□□□ 0.81
TMEM35AQ53FP2 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
TMEM35AQ53FP2 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TMEM35AQ53FP2 CCDC92B-201ENST00000575506 885 ntBASIC20.1■□□□□ 0.81
TMEM35AQ53FP2 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TMEM35AQ53FP2 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TMEM35AQ53FP2 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.1■□□□□ 0.81
TMEM35AQ53FP2 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TMEM35AQ53FP2 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.1■□□□□ 0.81
TMEM35AQ53FP2 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TMEM35AQ53FP2 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TMEM35AQ53FP2 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TMEM35AQ53FP2 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TMEM35AQ53FP2 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TMEM35AQ53FP2 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TMEM35AQ53FP2 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.1■□□□□ 0.81
TMEM35AQ53FP2 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM35AQ53FP2 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM35AQ53FP2 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM35AQ53FP2 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.09■□□□□ 0.81
TMEM35AQ53FP2 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.09■□□□□ 0.81
TMEM35AQ53FP2 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.09■□□□□ 0.81
TMEM35AQ53FP2 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM35AQ53FP2 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM35AQ53FP2 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
TMEM35AQ53FP2 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
TMEM35AQ53FP2 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TMEM35AQ53FP2 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TMEM35AQ53FP2 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TMEM35AQ53FP2 AC019069.1-201ENST00000610008 1333 ntBASIC20.08■□□□□ 0.81
TMEM35AQ53FP2 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
TMEM35AQ53FP2 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
TMEM35AQ53FP2 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TMEM35AQ53FP2 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.08■□□□□ 0.81
TMEM35AQ53FP2 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TMEM35AQ53FP2 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TMEM35AQ53FP2 KRT18P14-201ENST00000534205 1250 ntBASIC20.08■□□□□ 0.81
TMEM35AQ53FP2 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.08■□□□□ 0.81
TMEM35AQ53FP2 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.08■□□□□ 0.8
TMEM35AQ53FP2 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TMEM35AQ53FP2 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TMEM35AQ53FP2 AC026310.3-201ENST00000625186 2373 ntBASIC20.08■□□□□ 0.8
TMEM35AQ53FP2 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TMEM35AQ53FP2 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM35AQ53FP2 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
TMEM35AQ53FP2 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
TMEM35AQ53FP2 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 8.6 ms