Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP6AP1LQ52LC2 AC131281.2-201ENST00000520478 145 ntBASIC20.4■□□□□ 0.86
ATP6AP1LQ52LC2 AP006587.3-201ENST00000525742 1516 ntBASIC20.4■□□□□ 0.86
ATP6AP1LQ52LC2 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.4■□□□□ 0.86
ATP6AP1LQ52LC2 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.4■□□□□ 0.86
ATP6AP1LQ52LC2 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.39■□□□□ 0.86
ATP6AP1LQ52LC2 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.39■□□□□ 0.86
ATP6AP1LQ52LC2 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.39■□□□□ 0.86
ATP6AP1LQ52LC2 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
ATP6AP1LQ52LC2 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP6AP1LQ52LC2 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ATP6AP1LQ52LC2 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.39■□□□□ 0.85
ATP6AP1LQ52LC2 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.39■□□□□ 0.85
ATP6AP1LQ52LC2 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ATP6AP1LQ52LC2 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ATP6AP1LQ52LC2 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP6AP1LQ52LC2 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP6AP1LQ52LC2 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.39■□□□□ 0.85
ATP6AP1LQ52LC2 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP6AP1LQ52LC2 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP6AP1LQ52LC2 AL049796.1-201ENST00000565336 1766 ntBASIC20.39■□□□□ 0.85
ATP6AP1LQ52LC2 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.85
ATP6AP1LQ52LC2 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP6AP1LQ52LC2 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP6AP1LQ52LC2 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
ATP6AP1LQ52LC2 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP6AP1LQ52LC2 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.38■□□□□ 0.85
ATP6AP1LQ52LC2 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
ATP6AP1LQ52LC2 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
ATP6AP1LQ52LC2 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.38■□□□□ 0.85
ATP6AP1LQ52LC2 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.38■□□□□ 0.85
ATP6AP1LQ52LC2 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP6AP1LQ52LC2 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ATP6AP1LQ52LC2 SLC25A24-204ENST00000569674 2357 ntBASIC20.38■□□□□ 0.85
ATP6AP1LQ52LC2 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
ATP6AP1LQ52LC2 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.38■□□□□ 0.85
ATP6AP1LQ52LC2 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.38■□□□□ 0.85
ATP6AP1LQ52LC2 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP6AP1LQ52LC2 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP6AP1LQ52LC2 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATP6AP1LQ52LC2 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP6AP1LQ52LC2 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.37■□□□□ 0.85
ATP6AP1LQ52LC2 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATP6AP1LQ52LC2 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.37■□□□□ 0.85
ATP6AP1LQ52LC2 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.37■□□□□ 0.85
ATP6AP1LQ52LC2 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP6AP1LQ52LC2 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
ATP6AP1LQ52LC2 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATP6AP1LQ52LC2 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATP6AP1LQ52LC2 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
ATP6AP1LQ52LC2 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP6AP1LQ52LC2 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP6AP1LQ52LC2 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP6AP1LQ52LC2 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP6AP1LQ52LC2 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATP6AP1LQ52LC2 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
ATP6AP1LQ52LC2 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP6AP1LQ52LC2 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
ATP6AP1LQ52LC2 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP6AP1LQ52LC2 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ATP6AP1LQ52LC2 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.36■□□□□ 0.85
ATP6AP1LQ52LC2 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.36■□□□□ 0.85
ATP6AP1LQ52LC2 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.36■□□□□ 0.85
ATP6AP1LQ52LC2 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP6AP1LQ52LC2 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP6AP1LQ52LC2 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP6AP1LQ52LC2 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.36■□□□□ 0.85
ATP6AP1LQ52LC2 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.36■□□□□ 0.85
ATP6AP1LQ52LC2 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP6AP1LQ52LC2 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP6AP1LQ52LC2 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6AP1LQ52LC2 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6AP1LQ52LC2 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.35■□□□□ 0.85
ATP6AP1LQ52LC2 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.35■□□□□ 0.85
ATP6AP1LQ52LC2 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6AP1LQ52LC2 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.35■□□□□ 0.85
ATP6AP1LQ52LC2 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6AP1LQ52LC2 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.35■□□□□ 0.85
ATP6AP1LQ52LC2 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.35■□□□□ 0.85
ATP6AP1LQ52LC2 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.35■□□□□ 0.85
ATP6AP1LQ52LC2 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.35■□□□□ 0.85
ATP6AP1LQ52LC2 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.35■□□□□ 0.85
ATP6AP1LQ52LC2 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.35■□□□□ 0.85
ATP6AP1LQ52LC2 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6AP1LQ52LC2 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6AP1LQ52LC2 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
ATP6AP1LQ52LC2 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6AP1LQ52LC2 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6AP1LQ52LC2 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
ATP6AP1LQ52LC2 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.34■□□□□ 0.85
ATP6AP1LQ52LC2 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
ATP6AP1LQ52LC2 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6AP1LQ52LC2 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.34■□□□□ 0.85
ATP6AP1LQ52LC2 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6AP1LQ52LC2 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6AP1LQ52LC2 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
ATP6AP1LQ52LC2 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6AP1LQ52LC2 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP6AP1LQ52LC2 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.33■□□□□ 0.85
ATP6AP1LQ52LC2 AL157384.1-201ENST00000445995 2473 ntBASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms