Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.64■□□□□ 0.57
PCGF3Q3KNV8 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PCGF3Q3KNV8 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PCGF3Q3KNV8 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.64■□□□□ 0.57
PCGF3Q3KNV8 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.64■□□□□ 0.57
PCGF3Q3KNV8 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
PCGF3Q3KNV8 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCGF3Q3KNV8 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
PCGF3Q3KNV8 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCGF3Q3KNV8 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.63■□□□□ 0.57
PCGF3Q3KNV8 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCGF3Q3KNV8 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCGF3Q3KNV8 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.63■□□□□ 0.57
PCGF3Q3KNV8 MIR572-201ENST00000384983 95 ntBASIC18.63■□□□□ 0.57
PCGF3Q3KNV8 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.63■□□□□ 0.57
PCGF3Q3KNV8 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.63■□□□□ 0.57
PCGF3Q3KNV8 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.63■□□□□ 0.57
PCGF3Q3KNV8 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.63■□□□□ 0.57
PCGF3Q3KNV8 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCGF3Q3KNV8 AL358852.1-201ENST00000623174 1268 ntBASIC18.63■□□□□ 0.57
PCGF3Q3KNV8 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PCGF3Q3KNV8 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.63■□□□□ 0.57
PCGF3Q3KNV8 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.63■□□□□ 0.57
PCGF3Q3KNV8 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCGF3Q3KNV8 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCGF3Q3KNV8 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.63■□□□□ 0.57
PCGF3Q3KNV8 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCGF3Q3KNV8 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCGF3Q3KNV8 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCGF3Q3KNV8 AL121603.2-201ENST00000557373 2117 ntBASIC18.62■□□□□ 0.57
PCGF3Q3KNV8 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCGF3Q3KNV8 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCGF3Q3KNV8 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCGF3Q3KNV8 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.62■□□□□ 0.57
PCGF3Q3KNV8 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.62■□□□□ 0.57
PCGF3Q3KNV8 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
PCGF3Q3KNV8 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCGF3Q3KNV8 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
PCGF3Q3KNV8 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCGF3Q3KNV8 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCGF3Q3KNV8 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PCGF3Q3KNV8 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCGF3Q3KNV8 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCGF3Q3KNV8 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCGF3Q3KNV8 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.61■□□□□ 0.57
PCGF3Q3KNV8 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCGF3Q3KNV8 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PCGF3Q3KNV8 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.61■□□□□ 0.57
PCGF3Q3KNV8 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.61■□□□□ 0.57
PCGF3Q3KNV8 AL031602.1-201ENST00000633169 911 ntBASIC18.61■□□□□ 0.57
PCGF3Q3KNV8 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCGF3Q3KNV8 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCGF3Q3KNV8 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.61■□□□□ 0.57
PCGF3Q3KNV8 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCGF3Q3KNV8 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCGF3Q3KNV8 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCGF3Q3KNV8 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCGF3Q3KNV8 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.61■□□□□ 0.57
PCGF3Q3KNV8 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PCGF3Q3KNV8 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCGF3Q3KNV8 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PCGF3Q3KNV8 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCGF3Q3KNV8 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCGF3Q3KNV8 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
PCGF3Q3KNV8 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCGF3Q3KNV8 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCGF3Q3KNV8 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCGF3Q3KNV8 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.6■□□□□ 0.57
PCGF3Q3KNV8 AL354811.1-201ENST00000610286 706 ntBASIC18.6■□□□□ 0.57
PCGF3Q3KNV8 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.6■□□□□ 0.57
PCGF3Q3KNV8 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCGF3Q3KNV8 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCGF3Q3KNV8 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCGF3Q3KNV8 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCGF3Q3KNV8 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
PCGF3Q3KNV8 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCGF3Q3KNV8 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCGF3Q3KNV8 AC010141.3-201ENST00000456659 717 ntBASIC18.59■□□□□ 0.57
PCGF3Q3KNV8 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.59■□□□□ 0.57
PCGF3Q3KNV8 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCGF3Q3KNV8 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCGF3Q3KNV8 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCGF3Q3KNV8 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCGF3Q3KNV8 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.59■□□□□ 0.57
PCGF3Q3KNV8 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCGF3Q3KNV8 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.59■□□□□ 0.57
PCGF3Q3KNV8 LINC01960-201ENST00000563759 1884 ntBASIC18.58■□□□□ 0.57
PCGF3Q3KNV8 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCGF3Q3KNV8 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCGF3Q3KNV8 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.58■□□□□ 0.57
PCGF3Q3KNV8 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.58■□□□□ 0.57
PCGF3Q3KNV8 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.58■□□□□ 0.57
PCGF3Q3KNV8 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCGF3Q3KNV8 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.58■□□□□ 0.56
PCGF3Q3KNV8 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCGF3Q3KNV8 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.58■□□□□ 0.56
PCGF3Q3KNV8 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.58■□□□□ 0.56
PCGF3Q3KNV8 RARRES2P6-201ENST00000567333 442 ntBASIC18.58■□□□□ 0.56
PCGF3Q3KNV8 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.58■□□□□ 0.56
PCGF3Q3KNV8 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms