Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RSPO4Q2I0M5 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RSPO4Q2I0M5 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.67■□□□□ 0.9
RSPO4Q2I0M5 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.67■□□□□ 0.9
RSPO4Q2I0M5 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RSPO4Q2I0M5 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.67■□□□□ 0.9
RSPO4Q2I0M5 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
RSPO4Q2I0M5 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.67■□□□□ 0.9
RSPO4Q2I0M5 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.67■□□□□ 0.9
RSPO4Q2I0M5 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.67■□□□□ 0.9
RSPO4Q2I0M5 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RSPO4Q2I0M5 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RSPO4Q2I0M5 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RSPO4Q2I0M5 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RSPO4Q2I0M5 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RSPO4Q2I0M5 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RSPO4Q2I0M5 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RSPO4Q2I0M5 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.66■□□□□ 0.9
RSPO4Q2I0M5 PNMA6B-201ENST00000538162 1200 ntBASIC20.66■□□□□ 0.9
RSPO4Q2I0M5 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.66■□□□□ 0.9
RSPO4Q2I0M5 AC069544.1-201ENST00000609399 999 ntBASIC20.66■□□□□ 0.9
RSPO4Q2I0M5 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.66■□□□□ 0.9
RSPO4Q2I0M5 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RSPO4Q2I0M5 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
RSPO4Q2I0M5 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RSPO4Q2I0M5 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RSPO4Q2I0M5 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RSPO4Q2I0M5 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.66■□□□□ 0.9
RSPO4Q2I0M5 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RSPO4Q2I0M5 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.66■□□□□ 0.9
RSPO4Q2I0M5 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RSPO4Q2I0M5 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RSPO4Q2I0M5 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RSPO4Q2I0M5 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RSPO4Q2I0M5 AC138932.3-201ENST00000567634 1902 ntBASIC20.65■□□□□ 0.9
RSPO4Q2I0M5 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RSPO4Q2I0M5 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.65■□□□□ 0.9
RSPO4Q2I0M5 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.65■□□□□ 0.9
RSPO4Q2I0M5 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RSPO4Q2I0M5 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
RSPO4Q2I0M5 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RSPO4Q2I0M5 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RSPO4Q2I0M5 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.65■□□□□ 0.9
RSPO4Q2I0M5 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.65■□□□□ 0.9
RSPO4Q2I0M5 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.65■□□□□ 0.9
RSPO4Q2I0M5 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.65■□□□□ 0.9
RSPO4Q2I0M5 MIR4785-201ENST00000585005 73 ntBASIC20.65■□□□□ 0.9
RSPO4Q2I0M5 AC053503.5-201ENST00000601508 636 ntBASIC20.65■□□□□ 0.9
RSPO4Q2I0M5 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.65■□□□□ 0.9
RSPO4Q2I0M5 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RSPO4Q2I0M5 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RSPO4Q2I0M5 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RSPO4Q2I0M5 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.64■□□□□ 0.9
RSPO4Q2I0M5 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RSPO4Q2I0M5 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RSPO4Q2I0M5 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RSPO4Q2I0M5 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.64■□□□□ 0.89
RSPO4Q2I0M5 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.64■□□□□ 0.89
RSPO4Q2I0M5 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.64■□□□□ 0.89
RSPO4Q2I0M5 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.64■□□□□ 0.89
RSPO4Q2I0M5 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
RSPO4Q2I0M5 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
RSPO4Q2I0M5 AL049637.2-201ENST00000641778 930 ntBASIC20.64■□□□□ 0.89
RSPO4Q2I0M5 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
RSPO4Q2I0M5 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RSPO4Q2I0M5 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RSPO4Q2I0M5 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
RSPO4Q2I0M5 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RSPO4Q2I0M5 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
RSPO4Q2I0M5 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
RSPO4Q2I0M5 KRT17P1-201ENST00000399211 1546 ntBASIC20.63■□□□□ 0.89
RSPO4Q2I0M5 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RSPO4Q2I0M5 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RSPO4Q2I0M5 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.63■□□□□ 0.89
RSPO4Q2I0M5 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RSPO4Q2I0M5 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RSPO4Q2I0M5 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RSPO4Q2I0M5 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RSPO4Q2I0M5 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RSPO4Q2I0M5 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.63■□□□□ 0.89
RSPO4Q2I0M5 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.63■□□□□ 0.89
RSPO4Q2I0M5 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.63■□□□□ 0.89
RSPO4Q2I0M5 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RSPO4Q2I0M5 AP001412.1-201ENST00000608405 714 ntBASIC20.63■□□□□ 0.89
RSPO4Q2I0M5 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
RSPO4Q2I0M5 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RSPO4Q2I0M5 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
RSPO4Q2I0M5 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
RSPO4Q2I0M5 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RSPO4Q2I0M5 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.62■□□□□ 0.89
RSPO4Q2I0M5 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.62■□□□□ 0.89
RSPO4Q2I0M5 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RSPO4Q2I0M5 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RSPO4Q2I0M5 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RSPO4Q2I0M5 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RSPO4Q2I0M5 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.62■□□□□ 0.89
RSPO4Q2I0M5 AC079630.1-202ENST00000618127 1840 ntBASIC20.62■□□□□ 0.89
RSPO4Q2I0M5 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RSPO4Q2I0M5 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
RSPO4Q2I0M5 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms