Protein–RNA interactions for Protein: P61165

TMEM258, Transmembrane protein 258, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258P61165 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM258P61165 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC12.78□□□□□ -0.36
TMEM258P61165 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC12.78□□□□□ -0.36
TMEM258P61165 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM258P61165 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC12.78□□□□□ -0.36
TMEM258P61165 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC12.77□□□□□ -0.36
TMEM258P61165 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TMEM258P61165 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC12.77□□□□□ -0.36
TMEM258P61165 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC12.77□□□□□ -0.36
TMEM258P61165 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
TMEM258P61165 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TMEM258P61165 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TMEM258P61165 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC12.77□□□□□ -0.36
TMEM258P61165 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TMEM258P61165 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC12.77□□□□□ -0.36
TMEM258P61165 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TMEM258P61165 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TMEM258P61165 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TMEM258P61165 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
TMEM258P61165 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM258P61165 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC12.77□□□□□ -0.37
TMEM258P61165 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM258P61165 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM258P61165 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC12.77□□□□□ -0.37
TMEM258P61165 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM258P61165 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM258P61165 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM258P61165 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM258P61165 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM258P61165 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC12.77□□□□□ -0.37
TMEM258P61165 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM258P61165 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM258P61165 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM258P61165 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM258P61165 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC12.77□□□□□ -0.37
TMEM258P61165 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM258P61165 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC12.77□□□□□ -0.37
TMEM258P61165 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM258P61165 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM258P61165 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM258P61165 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM258P61165 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
TMEM258P61165 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM258P61165 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC12.76□□□□□ -0.37
TMEM258P61165 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
TMEM258P61165 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM258P61165 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
TMEM258P61165 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM258P61165 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC12.76□□□□□ -0.37
TMEM258P61165 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC12.76□□□□□ -0.37
TMEM258P61165 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC12.76□□□□□ -0.37
TMEM258P61165 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
TMEM258P61165 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC12.76□□□□□ -0.37
TMEM258P61165 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC12.76□□□□□ -0.37
TMEM258P61165 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM258P61165 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM258P61165 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
TMEM258P61165 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM258P61165 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM258P61165 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
TMEM258P61165 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC12.76□□□□□ -0.37
TMEM258P61165 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
TMEM258P61165 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
TMEM258P61165 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM258P61165 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM258P61165 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM258P61165 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC12.76□□□□□ -0.37
TMEM258P61165 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
TMEM258P61165 AC104581.1-202ENST00000635932 2618 ntBASIC12.75□□□□□ -0.37
TMEM258P61165 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM258P61165 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM258P61165 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM258P61165 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM258P61165 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC12.75□□□□□ -0.37
TMEM258P61165 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM258P61165 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC12.75□□□□□ -0.37
TMEM258P61165 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC12.75□□□□□ -0.37
TMEM258P61165 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM258P61165 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM258P61165 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM258P61165 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM258P61165 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM258P61165 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
TMEM258P61165 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TMEM258P61165 AP000974.1-201ENST00000623909 2387 ntBASIC12.74□□□□□ -0.37
TMEM258P61165 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC12.74□□□□□ -0.37
TMEM258P61165 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
TMEM258P61165 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
TMEM258P61165 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
TMEM258P61165 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC12.74□□□□□ -0.37
TMEM258P61165 FEM1AP1-201ENST00000431297 1995 ntBASIC12.74□□□□□ -0.37
TMEM258P61165 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
TMEM258P61165 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
TMEM258P61165 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TMEM258P61165 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TMEM258P61165 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TMEM258P61165 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC12.74□□□□□ -0.37
TMEM258P61165 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TMEM258P61165 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TMEM258P61165 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms