Protein–RNA interactions for Protein: P50750

CDK9, Cyclin-dependent kinase 9, humanhuman

Known RBP Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9P50750 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.29■□□□□ 0.84
CDK9P50750 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDK9P50750 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDK9P50750 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDK9P50750 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CDK9P50750 AL157384.1-201ENST00000445995 2473 ntBASIC20.29■□□□□ 0.84
CDK9P50750 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.29■□□□□ 0.84
CDK9P50750 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.28■□□□□ 0.84
CDK9P50750 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDK9P50750 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDK9P50750 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDK9P50750 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.28■□□□□ 0.84
CDK9P50750 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDK9P50750 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.28■□□□□ 0.84
CDK9P50750 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CDK9P50750 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CDK9P50750 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.28■□□□□ 0.84
CDK9P50750 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CDK9P50750 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.28■□□□□ 0.84
CDK9P50750 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDK9P50750 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDK9P50750 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDK9P50750 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
CDK9P50750 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CDK9P50750 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDK9P50750 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDK9P50750 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.27■□□□□ 0.84
CDK9P50750 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDK9P50750 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CDK9P50750 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDK9P50750 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDK9P50750 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CDK9P50750 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDK9P50750 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDK9P50750 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CDK9P50750 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDK9P50750 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDK9P50750 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDK9P50750 AP001330.3-201ENST00000520123 633 ntBASIC20.26■□□□□ 0.83
CDK9P50750 AF213884.3-201ENST00000563833 479 ntBASIC20.26■□□□□ 0.83
CDK9P50750 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.26■□□□□ 0.83
CDK9P50750 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.26■□□□□ 0.83
CDK9P50750 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.26■□□□□ 0.83
CDK9P50750 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDK9P50750 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDK9P50750 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDK9P50750 OXCT2P1-201ENST00000447263 1535 ntBASIC20.26■□□□□ 0.83
CDK9P50750 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CDK9P50750 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDK9P50750 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CDK9P50750 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDK9P50750 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.25■□□□□ 0.83
CDK9P50750 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDK9P50750 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.25■□□□□ 0.83
CDK9P50750 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDK9P50750 MIR939-201ENST00000401314 82 ntBASIC20.25■□□□□ 0.83
CDK9P50750 AL136967.2-201ENST00000623968 743 ntBASIC20.25■□□□□ 0.83
CDK9P50750 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDK9P50750 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDK9P50750 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CDK9P50750 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDK9P50750 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
CDK9P50750 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDK9P50750 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.25■□□□□ 0.83
CDK9P50750 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.25■□□□□ 0.83
CDK9P50750 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CDK9P50750 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.25■□□□□ 0.83
CDK9P50750 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDK9P50750 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.24■□□□□ 0.83
CDK9P50750 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CDK9P50750 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDK9P50750 AC026471.6-201ENST00000622954 1905 ntBASIC20.24■□□□□ 0.83
CDK9P50750 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CDK9P50750 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDK9P50750 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.24■□□□□ 0.83
CDK9P50750 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDK9P50750 AP005435.1-201ENST00000529293 1178 ntBASIC20.24■□□□□ 0.83
CDK9P50750 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.24■□□□□ 0.83
CDK9P50750 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CDK9P50750 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
CDK9P50750 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.24■□□□□ 0.83
CDK9P50750 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDK9P50750 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CDK9P50750 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.23■□□□□ 0.83
CDK9P50750 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CDK9P50750 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CDK9P50750 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CDK9P50750 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
CDK9P50750 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDK9P50750 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDK9P50750 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDK9P50750 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDK9P50750 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
CDK9P50750 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDK9P50750 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CDK9P50750 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.23■□□□□ 0.83
CDK9P50750 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDK9P50750 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDK9P50750 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDK9P50750 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms