Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCP4P48539 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCP4P48539 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCP4P48539 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
PCP4P48539 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCP4P48539 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.73□□□□□ -0.05
PCP4P48539 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
PCP4P48539 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCP4P48539 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
PCP4P48539 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
PCP4P48539 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PCP4P48539 AC084018.2-201ENST00000613093 2607 ntBASIC14.73□□□□□ -0.05
PCP4P48539 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.73□□□□□ -0.05
PCP4P48539 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PCP4P48539 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.73□□□□□ -0.05
PCP4P48539 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.73□□□□□ -0.05
PCP4P48539 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC14.73□□□□□ -0.05
PCP4P48539 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC14.73□□□□□ -0.05
PCP4P48539 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCP4P48539 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCP4P48539 CICP6-201ENST00000457191 2729 ntBASIC14.72□□□□□ -0.05
PCP4P48539 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC14.72□□□□□ -0.05
PCP4P48539 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
PCP4P48539 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCP4P48539 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
PCP4P48539 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCP4P48539 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCP4P48539 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCP4P48539 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCP4P48539 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCP4P48539 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCP4P48539 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCP4P48539 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
PCP4P48539 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCP4P48539 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC14.72□□□□□ -0.05
PCP4P48539 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCP4P48539 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.72□□□□□ -0.05
PCP4P48539 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC14.72□□□□□ -0.05
PCP4P48539 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC14.72□□□□□ -0.05
PCP4P48539 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCP4P48539 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCP4P48539 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCP4P48539 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCP4P48539 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PCP4P48539 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.05
PCP4P48539 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PCP4P48539 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCP4P48539 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
PCP4P48539 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCP4P48539 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC14.71□□□□□ -0.05
PCP4P48539 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC14.71□□□□□ -0.05
PCP4P48539 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCP4P48539 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
PCP4P48539 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
PCP4P48539 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCP4P48539 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCP4P48539 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
PCP4P48539 AC092850.2-201ENST00000623821 2697 ntBASIC14.71□□□□□ -0.05
PCP4P48539 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC14.71□□□□□ -0.05
PCP4P48539 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
PCP4P48539 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
PCP4P48539 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
PCP4P48539 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
PCP4P48539 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
PCP4P48539 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
PCP4P48539 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
PCP4P48539 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC14.71□□□□□ -0.06
PCP4P48539 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
PCP4P48539 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
PCP4P48539 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
PCP4P48539 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCP4P48539 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
PCP4P48539 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
PCP4P48539 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCP4P48539 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCP4P48539 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.7□□□□□ -0.06
PCP4P48539 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCP4P48539 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCP4P48539 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCP4P48539 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC14.7□□□□□ -0.06
PCP4P48539 AC010501.1-201ENST00000606270 1962 ntBASIC14.7□□□□□ -0.06
PCP4P48539 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCP4P48539 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCP4P48539 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
PCP4P48539 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCP4P48539 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCP4P48539 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCP4P48539 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
PCP4P48539 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCP4P48539 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCP4P48539 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCP4P48539 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCP4P48539 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCP4P48539 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCP4P48539 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCP4P48539 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCP4P48539 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC14.69□□□□□ -0.06
PCP4P48539 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCP4P48539 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCP4P48539 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms