Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC15.52■□□□□ 0.08
CKS2P33552 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC15.52■□□□□ 0.08
CKS2P33552 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CKS2P33552 RNF126P1-201ENST00000567452 1320 ntBASIC15.52■□□□□ 0.08
CKS2P33552 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CKS2P33552 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CKS2P33552 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
CKS2P33552 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
CKS2P33552 KRT18P24-201ENST00000344739 1156 ntBASIC15.52■□□□□ 0.08
CKS2P33552 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CKS2P33552 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CKS2P33552 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC15.52■□□□□ 0.08
CKS2P33552 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CKS2P33552 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CKS2P33552 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC15.52■□□□□ 0.07
CKS2P33552 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC15.52■□□□□ 0.07
CKS2P33552 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC15.52■□□□□ 0.07
CKS2P33552 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
CKS2P33552 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CKS2P33552 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CKS2P33552 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CKS2P33552 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CKS2P33552 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CKS2P33552 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CKS2P33552 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CKS2P33552 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CKS2P33552 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC15.51■□□□□ 0.07
CKS2P33552 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CKS2P33552 DYM-203ENST00000442713 2147 ntTSL 2 BASIC15.51■□□□□ 0.07
CKS2P33552 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CKS2P33552 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CKS2P33552 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC15.51■□□□□ 0.07
CKS2P33552 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CKS2P33552 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CKS2P33552 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC15.51■□□□□ 0.07
CKS2P33552 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CKS2P33552 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
CKS2P33552 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CKS2P33552 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CKS2P33552 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CKS2P33552 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC15.5■□□□□ 0.07
CKS2P33552 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CKS2P33552 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CKS2P33552 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CKS2P33552 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC15.5■□□□□ 0.07
CKS2P33552 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CKS2P33552 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CKS2P33552 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CKS2P33552 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC15.5■□□□□ 0.07
CKS2P33552 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CKS2P33552 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CKS2P33552 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC15.5■□□□□ 0.07
CKS2P33552 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC15.5■□□□□ 0.07
CKS2P33552 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC15.5■□□□□ 0.07
CKS2P33552 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CKS2P33552 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CKS2P33552 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC15.5■□□□□ 0.07
CKS2P33552 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CKS2P33552 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CKS2P33552 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CKS2P33552 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CKS2P33552 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CKS2P33552 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CKS2P33552 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC15.5■□□□□ 0.07
CKS2P33552 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CKS2P33552 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CKS2P33552 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CKS2P33552 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CKS2P33552 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CKS2P33552 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC15.5■□□□□ 0.07
CKS2P33552 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC15.5■□□□□ 0.07
CKS2P33552 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC15.49■□□□□ 0.07
CKS2P33552 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CKS2P33552 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CKS2P33552 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC15.49■□□□□ 0.07
CKS2P33552 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
CKS2P33552 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
CKS2P33552 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC15.49■□□□□ 0.07
CKS2P33552 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CKS2P33552 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC15.49■□□□□ 0.07
CKS2P33552 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CKS2P33552 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC15.49■□□□□ 0.07
CKS2P33552 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CKS2P33552 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CKS2P33552 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CKS2P33552 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC15.49■□□□□ 0.07
CKS2P33552 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC15.49■□□□□ 0.07
CKS2P33552 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC15.49■□□□□ 0.07
CKS2P33552 PVT1-219ENST00000523427 938 ntTSL 3 BASIC15.49■□□□□ 0.07
CKS2P33552 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CKS2P33552 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CKS2P33552 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CKS2P33552 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CKS2P33552 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CKS2P33552 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CKS2P33552 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CKS2P33552 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.49■□□□□ 0.07
CKS2P33552 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CKS2P33552 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC15.49■□□□□ 0.07
CKS2P33552 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms