Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 KRT18P20-201ENST00000548986 1279 ntBASIC17.88■□□□□ 0.45
COL8A2P25067 SLC7A5P2-201ENST00000553010 536 ntBASIC17.88■□□□□ 0.45
COL8A2P25067 DUX4L16-201ENST00000555130 1264 ntBASIC17.88■□□□□ 0.45
COL8A2P25067 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.88■□□□□ 0.45
COL8A2P25067 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL8A2P25067 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COL8A2P25067 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.88■□□□□ 0.45
COL8A2P25067 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL8A2P25067 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.88■□□□□ 0.45
COL8A2P25067 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.88■□□□□ 0.45
COL8A2P25067 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.88■□□□□ 0.45
COL8A2P25067 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COL8A2P25067 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL8A2P25067 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL8A2P25067 AC233723.2-201ENST00000623798 2106 ntBASIC17.87■□□□□ 0.45
COL8A2P25067 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL8A2P25067 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
COL8A2P25067 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.87■□□□□ 0.45
COL8A2P25067 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.87■□□□□ 0.45
COL8A2P25067 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL8A2P25067 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL8A2P25067 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
COL8A2P25067 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL8A2P25067 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL8A2P25067 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL8A2P25067 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL8A2P25067 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL8A2P25067 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.87■□□□□ 0.45
COL8A2P25067 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL8A2P25067 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.87■□□□□ 0.45
COL8A2P25067 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.87■□□□□ 0.45
COL8A2P25067 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
COL8A2P25067 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.87■□□□□ 0.45
COL8A2P25067 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL8A2P25067 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL8A2P25067 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL8A2P25067 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
COL8A2P25067 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL8A2P25067 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL8A2P25067 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL8A2P25067 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
COL8A2P25067 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
COL8A2P25067 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
COL8A2P25067 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL8A2P25067 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL8A2P25067 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.86■□□□□ 0.45
COL8A2P25067 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COL8A2P25067 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COL8A2P25067 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.86■□□□□ 0.45
COL8A2P25067 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.86■□□□□ 0.45
COL8A2P25067 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.86■□□□□ 0.45
COL8A2P25067 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.86■□□□□ 0.45
COL8A2P25067 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.86■□□□□ 0.45
COL8A2P25067 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
COL8A2P25067 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL8A2P25067 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
COL8A2P25067 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COL8A2P25067 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.86■□□□□ 0.45
COL8A2P25067 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL8A2P25067 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL8A2P25067 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL8A2P25067 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL8A2P25067 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
COL8A2P25067 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL8A2P25067 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL8A2P25067 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL8A2P25067 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.85■□□□□ 0.45
COL8A2P25067 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.85■□□□□ 0.45
COL8A2P25067 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COL8A2P25067 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COL8A2P25067 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL8A2P25067 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL8A2P25067 AC006970.2-201ENST00000450065 779 ntBASIC17.85■□□□□ 0.45
COL8A2P25067 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL8A2P25067 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC17.85■□□□□ 0.45
COL8A2P25067 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.85■□□□□ 0.45
COL8A2P25067 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.85■□□□□ 0.45
COL8A2P25067 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COL8A2P25067 AL117328.2-201ENST00000624617 1940 ntBASIC17.85■□□□□ 0.45
COL8A2P25067 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
COL8A2P25067 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
COL8A2P25067 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL8A2P25067 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL8A2P25067 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.84■□□□□ 0.45
COL8A2P25067 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL8A2P25067 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
COL8A2P25067 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.84■□□□□ 0.45
COL8A2P25067 AC026471.6-201ENST00000622954 1905 ntBASIC17.84■□□□□ 0.45
COL8A2P25067 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
COL8A2P25067 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.84■□□□□ 0.45
COL8A2P25067 AC003102.1-202ENST00000563394 1796 ntBASIC17.84■□□□□ 0.45
COL8A2P25067 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL8A2P25067 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COL8A2P25067 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COL8A2P25067 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COL8A2P25067 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
COL8A2P25067 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
COL8A2P25067 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.84■□□□□ 0.45
COL8A2P25067 AC231657.2-201ENST00000624556 255 ntBASIC17.84■□□□□ 0.45
COL8A2P25067 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms