Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBL4AP11441 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
UBL4AP11441 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBL4AP11441 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
UBL4AP11441 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UBL4AP11441 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.51■□□□□ 0.71
UBL4AP11441 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.51■□□□□ 0.71
UBL4AP11441 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UBL4AP11441 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
UBL4AP11441 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.51■□□□□ 0.71
UBL4AP11441 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBL4AP11441 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
UBL4AP11441 AC005224.4-201ENST00000583262 1652 ntBASIC19.51■□□□□ 0.71
UBL4AP11441 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBL4AP11441 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBL4AP11441 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
UBL4AP11441 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UBL4AP11441 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBL4AP11441 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBL4AP11441 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.5■□□□□ 0.71
UBL4AP11441 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.5■□□□□ 0.71
UBL4AP11441 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBL4AP11441 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBL4AP11441 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.5■□□□□ 0.71
UBL4AP11441 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.5■□□□□ 0.71
UBL4AP11441 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.5■□□□□ 0.71
UBL4AP11441 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
UBL4AP11441 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBL4AP11441 MIR6084-201ENST00000622012 110 ntBASIC19.5■□□□□ 0.71
UBL4AP11441 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBL4AP11441 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.5■□□□□ 0.71
UBL4AP11441 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
UBL4AP11441 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBL4AP11441 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
UBL4AP11441 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.5■□□□□ 0.71
UBL4AP11441 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.49■□□□□ 0.71
UBL4AP11441 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
UBL4AP11441 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
UBL4AP11441 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.49■□□□□ 0.71
UBL4AP11441 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
UBL4AP11441 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.49■□□□□ 0.71
UBL4AP11441 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
UBL4AP11441 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
UBL4AP11441 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBL4AP11441 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
UBL4AP11441 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
UBL4AP11441 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.48■□□□□ 0.71
UBL4AP11441 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
UBL4AP11441 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.48■□□□□ 0.71
UBL4AP11441 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBL4AP11441 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBL4AP11441 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBL4AP11441 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.48■□□□□ 0.71
UBL4AP11441 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
UBL4AP11441 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.48■□□□□ 0.71
UBL4AP11441 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBL4AP11441 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
UBL4AP11441 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.48■□□□□ 0.71
UBL4AP11441 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.48■□□□□ 0.71
UBL4AP11441 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
UBL4AP11441 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
UBL4AP11441 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBL4AP11441 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
UBL4AP11441 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBL4AP11441 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
UBL4AP11441 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBL4AP11441 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBL4AP11441 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
UBL4AP11441 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.48■□□□□ 0.71
UBL4AP11441 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBL4AP11441 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.48■□□□□ 0.71
UBL4AP11441 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBL4AP11441 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
UBL4AP11441 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBL4AP11441 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBL4AP11441 AC055733.4-201ENST00000638462 1354 ntBASIC19.47■□□□□ 0.71
UBL4AP11441 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.47■□□□□ 0.71
UBL4AP11441 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
UBL4AP11441 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
UBL4AP11441 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.47■□□□□ 0.71
UBL4AP11441 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.47■□□□□ 0.71
UBL4AP11441 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.47■□□□□ 0.71
UBL4AP11441 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.47■□□□□ 0.71
UBL4AP11441 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBL4AP11441 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
UBL4AP11441 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.47■□□□□ 0.71
UBL4AP11441 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
UBL4AP11441 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBL4AP11441 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
UBL4AP11441 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
UBL4AP11441 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
UBL4AP11441 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBL4AP11441 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.46■□□□□ 0.71
UBL4AP11441 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBL4AP11441 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBL4AP11441 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBL4AP11441 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBL4AP11441 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.46■□□□□ 0.71
UBL4AP11441 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.46■□□□□ 0.71
UBL4AP11441 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms