Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBCP0CG48 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
UBCP0CG48 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
UBCP0CG48 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
UBCP0CG48 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
UBCP0CG48 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.49■□□□□ 0.55
UBCP0CG48 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.49■□□□□ 0.55
UBCP0CG48 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.49■□□□□ 0.55
UBCP0CG48 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBCP0CG48 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBCP0CG48 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
UBCP0CG48 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBCP0CG48 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
UBCP0CG48 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.49■□□□□ 0.55
UBCP0CG48 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.49■□□□□ 0.55
UBCP0CG48 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
UBCP0CG48 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBCP0CG48 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBCP0CG48 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
UBCP0CG48 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBCP0CG48 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UBCP0CG48 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBCP0CG48 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UBCP0CG48 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBCP0CG48 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBCP0CG48 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBCP0CG48 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBCP0CG48 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.48■□□□□ 0.55
UBCP0CG48 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.48■□□□□ 0.55
UBCP0CG48 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBCP0CG48 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UBCP0CG48 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UBCP0CG48 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.48■□□□□ 0.55
UBCP0CG48 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UBCP0CG48 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.48■□□□□ 0.55
UBCP0CG48 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBCP0CG48 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UBCP0CG48 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.48■□□□□ 0.55
UBCP0CG48 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBCP0CG48 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBCP0CG48 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
UBCP0CG48 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBCP0CG48 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.47■□□□□ 0.55
UBCP0CG48 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.47■□□□□ 0.55
UBCP0CG48 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBCP0CG48 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
UBCP0CG48 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBCP0CG48 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.47■□□□□ 0.55
UBCP0CG48 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBCP0CG48 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBCP0CG48 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBCP0CG48 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UBCP0CG48 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBCP0CG48 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UBCP0CG48 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.47■□□□□ 0.55
UBCP0CG48 MIR4466-201ENST00000606121 54 ntBASIC18.47■□□□□ 0.55
UBCP0CG48 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
UBCP0CG48 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
UBCP0CG48 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.47■□□□□ 0.55
UBCP0CG48 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBCP0CG48 AP006587.3-201ENST00000525742 1516 ntBASIC18.47■□□□□ 0.55
UBCP0CG48 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBCP0CG48 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
UBCP0CG48 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.47■□□□□ 0.55
UBCP0CG48 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBCP0CG48 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBCP0CG48 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBCP0CG48 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.46■□□□□ 0.55
UBCP0CG48 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBCP0CG48 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBCP0CG48 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.46■□□□□ 0.55
UBCP0CG48 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.46■□□□□ 0.55
UBCP0CG48 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
UBCP0CG48 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
UBCP0CG48 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
UBCP0CG48 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.46■□□□□ 0.55
UBCP0CG48 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
UBCP0CG48 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.46■□□□□ 0.55
UBCP0CG48 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBCP0CG48 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBCP0CG48 AL049796.1-201ENST00000565336 1766 ntBASIC18.45■□□□□ 0.54
UBCP0CG48 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBCP0CG48 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBCP0CG48 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBCP0CG48 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBCP0CG48 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBCP0CG48 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.45■□□□□ 0.54
UBCP0CG48 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBCP0CG48 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
UBCP0CG48 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.45■□□□□ 0.54
UBCP0CG48 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBCP0CG48 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBCP0CG48 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBCP0CG48 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
UBCP0CG48 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
UBCP0CG48 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.45■□□□□ 0.54
UBCP0CG48 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.45■□□□□ 0.54
UBCP0CG48 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBCP0CG48 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
UBCP0CG48 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms