Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC16.37■□□□□ 0.21
CXCL1P09341 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CXCL1P09341 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CXCL1P09341 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CXCL1P09341 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CXCL1P09341 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CXCL1P09341 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CXCL1P09341 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CXCL1P09341 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CXCL1P09341 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CXCL1P09341 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CXCL1P09341 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CXCL1P09341 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC16.37■□□□□ 0.21
CXCL1P09341 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC16.37■□□□□ 0.21
CXCL1P09341 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CXCL1P09341 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CXCL1P09341 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CXCL1P09341 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CXCL1P09341 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CXCL1P09341 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CXCL1P09341 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CXCL1P09341 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CXCL1P09341 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CXCL1P09341 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CXCL1P09341 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CXCL1P09341 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC16.36■□□□□ 0.21
CXCL1P09341 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC16.36■□□□□ 0.21
CXCL1P09341 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.36■□□□□ 0.21
CXCL1P09341 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CXCL1P09341 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.36■□□□□ 0.21
CXCL1P09341 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CXCL1P09341 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CXCL1P09341 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CXCL1P09341 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.36■□□□□ 0.21
CXCL1P09341 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CXCL1P09341 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC16.36■□□□□ 0.21
CXCL1P09341 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CXCL1P09341 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CXCL1P09341 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CXCL1P09341 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CXCL1P09341 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC16.36■□□□□ 0.21
CXCL1P09341 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CXCL1P09341 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC16.36■□□□□ 0.21
CXCL1P09341 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.36■□□□□ 0.21
CXCL1P09341 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CXCL1P09341 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CXCL1P09341 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CXCL1P09341 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CXCL1P09341 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC16.35■□□□□ 0.21
CXCL1P09341 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CXCL1P09341 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.35■□□□□ 0.21
CXCL1P09341 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CXCL1P09341 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.35■□□□□ 0.21
CXCL1P09341 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CXCL1P09341 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CXCL1P09341 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC16.35■□□□□ 0.21
CXCL1P09341 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CXCL1P09341 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CXCL1P09341 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CXCL1P09341 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CXCL1P09341 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CXCL1P09341 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CXCL1P09341 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXCL1P09341 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.34■□□□□ 0.21
CXCL1P09341 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CXCL1P09341 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC16.34■□□□□ 0.21
CXCL1P09341 AC004448.1-201ENST00000458332 883 ntBASIC16.34■□□□□ 0.21
CXCL1P09341 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXCL1P09341 HYI-213ENST00000583037 1322 ntTSL 5 BASIC16.34■□□□□ 0.21
CXCL1P09341 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXCL1P09341 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
CXCL1P09341 TNXA-203ENST00000507684 2038 ntBASIC16.34■□□□□ 0.21
CXCL1P09341 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXCL1P09341 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CXCL1P09341 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXCL1P09341 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXCL1P09341 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC16.34■□□□□ 0.21
CXCL1P09341 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC16.34■□□□□ 0.21
CXCL1P09341 AP000974.1-201ENST00000623909 2387 ntBASIC16.34■□□□□ 0.21
CXCL1P09341 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CXCL1P09341 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CXCL1P09341 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.33■□□□□ 0.21
CXCL1P09341 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CXCL1P09341 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CXCL1P09341 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
CXCL1P09341 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CXCL1P09341 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CXCL1P09341 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CXCL1P09341 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.33■□□□□ 0.21
CXCL1P09341 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CXCL1P09341 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CXCL1P09341 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CXCL1P09341 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CXCL1P09341 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXCL1P09341 MTX2-204ENST00000443241 799 ntTSL 3 BASIC16.33■□□□□ 0.2
CXCL1P09341 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC16.33■□□□□ 0.2
CXCL1P09341 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CXCL1P09341 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.33■□□□□ 0.2
CXCL1P09341 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXCL1P09341 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms