Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCATP04180 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCATP04180 BX005040.4-201ENST00000637145 1518 ntBASIC18.46■□□□□ 0.55
LCATP04180 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
LCATP04180 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCATP04180 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
LCATP04180 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.46■□□□□ 0.54
LCATP04180 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LCATP04180 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
LCATP04180 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
LCATP04180 AL137060.1-201ENST00000618151 2648 ntBASIC18.45■□□□□ 0.54
LCATP04180 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.45■□□□□ 0.54
LCATP04180 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LCATP04180 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LCATP04180 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LCATP04180 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
LCATP04180 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LCATP04180 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.45■□□□□ 0.54
LCATP04180 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LCATP04180 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.45■□□□□ 0.54
LCATP04180 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
LCATP04180 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.45■□□□□ 0.54
LCATP04180 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LCATP04180 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LCATP04180 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.45■□□□□ 0.54
LCATP04180 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.45■□□□□ 0.54
LCATP04180 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LCATP04180 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LCATP04180 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.44■□□□□ 0.54
LCATP04180 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
LCATP04180 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LCATP04180 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LCATP04180 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
LCATP04180 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.44■□□□□ 0.54
LCATP04180 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
LCATP04180 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.44■□□□□ 0.54
LCATP04180 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.44■□□□□ 0.54
LCATP04180 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LCATP04180 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LCATP04180 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.44■□□□□ 0.54
LCATP04180 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LCATP04180 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LCATP04180 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LCATP04180 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LCATP04180 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
LCATP04180 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
LCATP04180 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
LCATP04180 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LCATP04180 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LCATP04180 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LCATP04180 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LCATP04180 MIR638-201ENST00000385237 100 ntBASIC18.43■□□□□ 0.54
LCATP04180 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LCATP04180 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.43■□□□□ 0.54
LCATP04180 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.43■□□□□ 0.54
LCATP04180 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
LCATP04180 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.43■□□□□ 0.54
LCATP04180 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LCATP04180 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.43■□□□□ 0.54
LCATP04180 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
LCATP04180 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
LCATP04180 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LCATP04180 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.42■□□□□ 0.54
LCATP04180 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.42■□□□□ 0.54
LCATP04180 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.42■□□□□ 0.54
LCATP04180 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LCATP04180 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
LCATP04180 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.42■□□□□ 0.54
LCATP04180 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LCATP04180 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.42■□□□□ 0.54
LCATP04180 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.42■□□□□ 0.54
LCATP04180 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
LCATP04180 AC105265.2-201ENST00000467189 838 ntBASIC18.42■□□□□ 0.54
LCATP04180 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.42■□□□□ 0.54
LCATP04180 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.42■□□□□ 0.54
LCATP04180 AC012414.1-201ENST00000556676 535 ntBASIC18.42■□□□□ 0.54
LCATP04180 AL354811.1-201ENST00000610286 706 ntBASIC18.42■□□□□ 0.54
LCATP04180 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.42■□□□□ 0.54
LCATP04180 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
LCATP04180 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
LCATP04180 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.42■□□□□ 0.54
LCATP04180 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
LCATP04180 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LCATP04180 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
LCATP04180 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LCATP04180 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.41■□□□□ 0.54
LCATP04180 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.41■□□□□ 0.54
LCATP04180 AC005224.4-201ENST00000583262 1652 ntBASIC18.41■□□□□ 0.54
LCATP04180 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LCATP04180 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.41■□□□□ 0.54
LCATP04180 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.41■□□□□ 0.54
LCATP04180 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
LCATP04180 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.41■□□□□ 0.54
LCATP04180 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LCATP04180 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LCATP04180 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LCATP04180 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.41■□□□□ 0.54
LCATP04180 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.41■□□□□ 0.54
LCATP04180 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.41■□□□□ 0.54
LCATP04180 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms