Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRAMEF2O60811 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
PRAMEF2O60811 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.86■□□□□ 0.77
PRAMEF2O60811 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.86■□□□□ 0.77
PRAMEF2O60811 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PRAMEF2O60811 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.86■□□□□ 0.77
PRAMEF2O60811 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRAMEF2O60811 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRAMEF2O60811 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.86■□□□□ 0.77
PRAMEF2O60811 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PRAMEF2O60811 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRAMEF2O60811 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.85■□□□□ 0.77
PRAMEF2O60811 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRAMEF2O60811 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PRAMEF2O60811 AC055733.4-201ENST00000638462 1354 ntBASIC19.85■□□□□ 0.77
PRAMEF2O60811 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.85■□□□□ 0.77
PRAMEF2O60811 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PRAMEF2O60811 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.85■□□□□ 0.77
PRAMEF2O60811 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PRAMEF2O60811 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.85■□□□□ 0.77
PRAMEF2O60811 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.85■□□□□ 0.77
PRAMEF2O60811 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PRAMEF2O60811 AC079140.4-201ENST00000507448 529 ntBASIC19.85■□□□□ 0.77
PRAMEF2O60811 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.85■□□□□ 0.77
PRAMEF2O60811 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.85■□□□□ 0.77
PRAMEF2O60811 AC080038.1-201ENST00000611274 1154 ntBASIC19.85■□□□□ 0.77
PRAMEF2O60811 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.85■□□□□ 0.77
PRAMEF2O60811 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRAMEF2O60811 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PRAMEF2O60811 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.84■□□□□ 0.77
PRAMEF2O60811 AC026471.6-201ENST00000622954 1905 ntBASIC19.84■□□□□ 0.77
PRAMEF2O60811 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRAMEF2O60811 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
PRAMEF2O60811 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
PRAMEF2O60811 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRAMEF2O60811 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRAMEF2O60811 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
PRAMEF2O60811 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.84■□□□□ 0.77
PRAMEF2O60811 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.84■□□□□ 0.77
PRAMEF2O60811 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.84■□□□□ 0.77
PRAMEF2O60811 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.84■□□□□ 0.77
PRAMEF2O60811 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
PRAMEF2O60811 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRAMEF2O60811 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRAMEF2O60811 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRAMEF2O60811 LINC00565-201ENST00000562710 2331 ntBASIC19.84■□□□□ 0.77
PRAMEF2O60811 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRAMEF2O60811 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.83■□□□□ 0.77
PRAMEF2O60811 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRAMEF2O60811 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRAMEF2O60811 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.83■□□□□ 0.77
PRAMEF2O60811 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.83■□□□□ 0.77
PRAMEF2O60811 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
PRAMEF2O60811 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
PRAMEF2O60811 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.83■□□□□ 0.77
PRAMEF2O60811 ID1-201ENST00000376105 1233 ntBASIC19.83■□□□□ 0.77
PRAMEF2O60811 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.83■□□□□ 0.77
PRAMEF2O60811 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.83■□□□□ 0.77
PRAMEF2O60811 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.83■□□□□ 0.77
PRAMEF2O60811 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PRAMEF2O60811 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PRAMEF2O60811 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
PRAMEF2O60811 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
PRAMEF2O60811 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PRAMEF2O60811 AC010542.4-201ENST00000563151 1910 ntBASIC19.82■□□□□ 0.76
PRAMEF2O60811 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.82■□□□□ 0.76
PRAMEF2O60811 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.82■□□□□ 0.76
PRAMEF2O60811 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.82■□□□□ 0.76
PRAMEF2O60811 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRAMEF2O60811 FBXW4P1-201ENST00000426721 2239 ntBASIC19.82■□□□□ 0.76
PRAMEF2O60811 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRAMEF2O60811 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
PRAMEF2O60811 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRAMEF2O60811 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.82■□□□□ 0.76
PRAMEF2O60811 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
PRAMEF2O60811 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.82■□□□□ 0.76
PRAMEF2O60811 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.82■□□□□ 0.76
PRAMEF2O60811 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.82■□□□□ 0.76
PRAMEF2O60811 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
PRAMEF2O60811 AC003102.1-202ENST00000563394 1796 ntBASIC19.82■□□□□ 0.76
PRAMEF2O60811 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRAMEF2O60811 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
PRAMEF2O60811 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
PRAMEF2O60811 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.81■□□□□ 0.76
PRAMEF2O60811 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRAMEF2O60811 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRAMEF2O60811 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRAMEF2O60811 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PRAMEF2O60811 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRAMEF2O60811 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.81■□□□□ 0.76
PRAMEF2O60811 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.81■□□□□ 0.76
PRAMEF2O60811 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRAMEF2O60811 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRAMEF2O60811 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRAMEF2O60811 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
PRAMEF2O60811 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRAMEF2O60811 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
PRAMEF2O60811 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PRAMEF2O60811 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PRAMEF2O60811 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms