Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
GMDSO60547 LINC01521-201ENST00000504184 1943 ntBASIC18.62■□□□□ 0.57
GMDSO60547 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GMDSO60547 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.62■□□□□ 0.57
GMDSO60547 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.62■□□□□ 0.57
GMDSO60547 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GMDSO60547 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
GMDSO60547 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.62■□□□□ 0.57
GMDSO60547 AP005435.1-201ENST00000529293 1178 ntBASIC18.62■□□□□ 0.57
GMDSO60547 AC079089.2-201ENST00000531211 1277 ntBASIC18.62■□□□□ 0.57
GMDSO60547 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GMDSO60547 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GMDSO60547 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GMDSO60547 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GMDSO60547 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.62■□□□□ 0.57
GMDSO60547 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.62■□□□□ 0.57
GMDSO60547 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
GMDSO60547 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
GMDSO60547 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GMDSO60547 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
GMDSO60547 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.61■□□□□ 0.57
GMDSO60547 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GMDSO60547 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.61■□□□□ 0.57
GMDSO60547 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
GMDSO60547 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GMDSO60547 EDA-201ENST00000338901 1233 ntBASIC18.61■□□□□ 0.57
GMDSO60547 SLC47A1P1-202ENST00000449666 945 ntBASIC18.61■□□□□ 0.57
GMDSO60547 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.61■□□□□ 0.57
GMDSO60547 AC133561.4-201ENST00000566112 224 ntBASIC18.61■□□□□ 0.57
GMDSO60547 AC010525.1-201ENST00000585559 441 ntBASIC18.61■□□□□ 0.57
GMDSO60547 AC233992.3-201ENST00000607491 485 ntBASIC18.61■□□□□ 0.57
GMDSO60547 AC110285.6-201ENST00000617652 491 ntBASIC18.61■□□□□ 0.57
GMDSO60547 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.61■□□□□ 0.57
GMDSO60547 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GMDSO60547 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
GMDSO60547 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GMDSO60547 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
GMDSO60547 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
GMDSO60547 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GMDSO60547 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
GMDSO60547 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GMDSO60547 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
GMDSO60547 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
GMDSO60547 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.6■□□□□ 0.57
GMDSO60547 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GMDSO60547 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GMDSO60547 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GMDSO60547 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
GMDSO60547 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GMDSO60547 AL139246.5-201ENST00000606645 996 ntBASIC18.6■□□□□ 0.57
GMDSO60547 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GMDSO60547 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GMDSO60547 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GMDSO60547 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GMDSO60547 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
GMDSO60547 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GMDSO60547 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.6■□□□□ 0.57
GMDSO60547 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GMDSO60547 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GMDSO60547 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GMDSO60547 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GMDSO60547 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
GMDSO60547 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.59■□□□□ 0.57
GMDSO60547 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GMDSO60547 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
GMDSO60547 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
GMDSO60547 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
GMDSO60547 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GMDSO60547 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.59■□□□□ 0.57
GMDSO60547 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GMDSO60547 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.59■□□□□ 0.57
GMDSO60547 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
GMDSO60547 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GMDSO60547 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.59■□□□□ 0.57
GMDSO60547 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GMDSO60547 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
GMDSO60547 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
GMDSO60547 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.59■□□□□ 0.57
GMDSO60547 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
GMDSO60547 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
GMDSO60547 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
GMDSO60547 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.58■□□□□ 0.57
GMDSO60547 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GMDSO60547 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.58■□□□□ 0.56
GMDSO60547 AC010141.3-201ENST00000456659 717 ntBASIC18.58■□□□□ 0.56
GMDSO60547 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.56
GMDSO60547 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.58■□□□□ 0.56
GMDSO60547 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
GMDSO60547 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.58■□□□□ 0.56
GMDSO60547 AL355001.2-201ENST00000620617 1191 ntBASIC18.58■□□□□ 0.56
GMDSO60547 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.58■□□□□ 0.56
GMDSO60547 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
GMDSO60547 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GMDSO60547 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.58■□□□□ 0.56
GMDSO60547 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
GMDSO60547 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GMDSO60547 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
GMDSO60547 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.57■□□□□ 0.56
GMDSO60547 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
GMDSO60547 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms