Protein–RNA interactions for Protein: O14817

TSPAN4, Tetraspanin-4, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4O14817 AC090877.2-201ENST00000558441 1738 ntBASIC17.63■□□□□ 0.41
TSPAN4O14817 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.63■□□□□ 0.41
TSPAN4O14817 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TSPAN4O14817 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TSPAN4O14817 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TSPAN4O14817 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TSPAN4O14817 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TSPAN4O14817 AC120024.1-201ENST00000562672 995 ntBASIC17.62■□□□□ 0.41
TSPAN4O14817 AL031848.2-201ENST00000607670 837 ntBASIC17.62■□□□□ 0.41
TSPAN4O14817 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC17.62■□□□□ 0.41
TSPAN4O14817 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.62■□□□□ 0.41
TSPAN4O14817 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TSPAN4O14817 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC17.62■□□□□ 0.41
TSPAN4O14817 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.62■□□□□ 0.41
TSPAN4O14817 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.62■□□□□ 0.41
TSPAN4O14817 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TSPAN4O14817 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TSPAN4O14817 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TSPAN4O14817 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TSPAN4O14817 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.61■□□□□ 0.41
TSPAN4O14817 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TSPAN4O14817 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TSPAN4O14817 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TSPAN4O14817 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TSPAN4O14817 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TSPAN4O14817 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
TSPAN4O14817 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TSPAN4O14817 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TSPAN4O14817 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TSPAN4O14817 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TSPAN4O14817 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TSPAN4O14817 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TSPAN4O14817 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TSPAN4O14817 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC17.6■□□□□ 0.41
TSPAN4O14817 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC17.6■□□□□ 0.41
TSPAN4O14817 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC17.6■□□□□ 0.41
TSPAN4O14817 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TSPAN4O14817 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TSPAN4O14817 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TSPAN4O14817 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
TSPAN4O14817 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC17.6■□□□□ 0.41
TSPAN4O14817 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TSPAN4O14817 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TSPAN4O14817 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TSPAN4O14817 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TSPAN4O14817 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.59■□□□□ 0.41
TSPAN4O14817 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.59■□□□□ 0.41
TSPAN4O14817 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.59■□□□□ 0.41
TSPAN4O14817 AFG3L1P-217ENST00000557444 2447 ntBASIC17.59■□□□□ 0.41
TSPAN4O14817 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TSPAN4O14817 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TSPAN4O14817 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
TSPAN4O14817 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.59■□□□□ 0.41
TSPAN4O14817 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TSPAN4O14817 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
TSPAN4O14817 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TSPAN4O14817 TK2-216ENST00000564917 1156 ntTSL 3 BASIC17.59■□□□□ 0.41
TSPAN4O14817 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TSPAN4O14817 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TSPAN4O14817 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TSPAN4O14817 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TSPAN4O14817 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TSPAN4O14817 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
TSPAN4O14817 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TSPAN4O14817 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
TSPAN4O14817 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TSPAN4O14817 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TSPAN4O14817 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TSPAN4O14817 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TSPAN4O14817 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC17.58■□□□□ 0.4
TSPAN4O14817 GAK-223ENST00000628912 497 ntTSL 5 BASIC17.58■□□□□ 0.4
TSPAN4O14817 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
TSPAN4O14817 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TSPAN4O14817 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
TSPAN4O14817 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
TSPAN4O14817 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.58■□□□□ 0.4
TSPAN4O14817 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TSPAN4O14817 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TSPAN4O14817 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.58■□□□□ 0.4
TSPAN4O14817 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TSPAN4O14817 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TSPAN4O14817 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TSPAN4O14817 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TSPAN4O14817 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.57■□□□□ 0.4
TSPAN4O14817 AC018445.3-201ENST00000624177 1945 ntBASIC17.57■□□□□ 0.4
TSPAN4O14817 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TSPAN4O14817 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TSPAN4O14817 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.57■□□□□ 0.4
TSPAN4O14817 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TSPAN4O14817 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.57■□□□□ 0.4
TSPAN4O14817 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TSPAN4O14817 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
TSPAN4O14817 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TSPAN4O14817 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TSPAN4O14817 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TSPAN4O14817 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TSPAN4O14817 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TSPAN4O14817 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TSPAN4O14817 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TSPAN4O14817 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms