Protein–RNA interactions for Protein: A6NJ08

MBD3L5, Putative methyl-CpG-binding domain protein 3-like 5, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L5A6NJ08 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
MBD3L5A6NJ08 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.69■□□□□ 0.58
MBD3L5A6NJ08 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
MBD3L5A6NJ08 AL138781.1-201ENST00000566567 1274 ntBASIC18.69■□□□□ 0.58
MBD3L5A6NJ08 AL162412.1-201ENST00000567129 965 ntBASIC18.69■□□□□ 0.58
MBD3L5A6NJ08 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.69■□□□□ 0.58
MBD3L5A6NJ08 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MBD3L5A6NJ08 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.69■□□□□ 0.58
MBD3L5A6NJ08 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MBD3L5A6NJ08 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MBD3L5A6NJ08 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MBD3L5A6NJ08 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC18.69■□□□□ 0.58
MBD3L5A6NJ08 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.69■□□□□ 0.58
MBD3L5A6NJ08 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
MBD3L5A6NJ08 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.68■□□□□ 0.58
MBD3L5A6NJ08 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MBD3L5A6NJ08 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.68■□□□□ 0.58
MBD3L5A6NJ08 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
MBD3L5A6NJ08 AC073210.2-201ENST00000430369 194 ntBASIC18.68■□□□□ 0.58
MBD3L5A6NJ08 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.68■□□□□ 0.58
MBD3L5A6NJ08 AC069236.1-201ENST00000604339 616 ntBASIC18.68■□□□□ 0.58
MBD3L5A6NJ08 AC008694.1-202ENST00000636953 945 ntBASIC18.68■□□□□ 0.58
MBD3L5A6NJ08 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MBD3L5A6NJ08 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MBD3L5A6NJ08 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MBD3L5A6NJ08 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MBD3L5A6NJ08 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MBD3L5A6NJ08 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.68■□□□□ 0.58
MBD3L5A6NJ08 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.68■□□□□ 0.58
MBD3L5A6NJ08 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.67■□□□□ 0.58
MBD3L5A6NJ08 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MBD3L5A6NJ08 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MBD3L5A6NJ08 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.67■□□□□ 0.58
MBD3L5A6NJ08 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MBD3L5A6NJ08 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
MBD3L5A6NJ08 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
MBD3L5A6NJ08 AL512625.2-201ENST00000417533 625 ntBASIC18.67■□□□□ 0.58
MBD3L5A6NJ08 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MBD3L5A6NJ08 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.67■□□□□ 0.58
MBD3L5A6NJ08 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.67■□□□□ 0.58
MBD3L5A6NJ08 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.67■□□□□ 0.58
MBD3L5A6NJ08 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
MBD3L5A6NJ08 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
MBD3L5A6NJ08 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
MBD3L5A6NJ08 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MBD3L5A6NJ08 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MBD3L5A6NJ08 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
MBD3L5A6NJ08 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.67■□□□□ 0.58
MBD3L5A6NJ08 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MBD3L5A6NJ08 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.66■□□□□ 0.58
MBD3L5A6NJ08 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MBD3L5A6NJ08 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.66■□□□□ 0.58
MBD3L5A6NJ08 AC069152.1-201ENST00000438030 544 ntBASIC18.66■□□□□ 0.58
MBD3L5A6NJ08 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.66■□□□□ 0.58
MBD3L5A6NJ08 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MBD3L5A6NJ08 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
MBD3L5A6NJ08 AC133041.1-202ENST00000642053 222 ntBASIC18.66■□□□□ 0.58
MBD3L5A6NJ08 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.66■□□□□ 0.58
MBD3L5A6NJ08 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.66■□□□□ 0.58
MBD3L5A6NJ08 AC026471.6-201ENST00000622954 1905 ntBASIC18.66■□□□□ 0.58
MBD3L5A6NJ08 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MBD3L5A6NJ08 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.65■□□□□ 0.58
MBD3L5A6NJ08 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
MBD3L5A6NJ08 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.65■□□□□ 0.58
MBD3L5A6NJ08 FAM99A-202ENST00000538190 1989 ntBASIC18.65■□□□□ 0.58
MBD3L5A6NJ08 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
MBD3L5A6NJ08 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
MBD3L5A6NJ08 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MBD3L5A6NJ08 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MBD3L5A6NJ08 AL591742.1-201ENST00000604433 565 ntBASIC18.65■□□□□ 0.58
MBD3L5A6NJ08 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.65■□□□□ 0.58
MBD3L5A6NJ08 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.65■□□□□ 0.58
MBD3L5A6NJ08 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.65■□□□□ 0.58
MBD3L5A6NJ08 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MBD3L5A6NJ08 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MBD3L5A6NJ08 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MBD3L5A6NJ08 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MBD3L5A6NJ08 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MBD3L5A6NJ08 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.64■□□□□ 0.58
MBD3L5A6NJ08 MKRN4P-201ENST00000444706 1521 ntBASIC18.64■□□□□ 0.58
MBD3L5A6NJ08 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.64■□□□□ 0.58
MBD3L5A6NJ08 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
MBD3L5A6NJ08 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
MBD3L5A6NJ08 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MBD3L5A6NJ08 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
MBD3L5A6NJ08 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MBD3L5A6NJ08 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MBD3L5A6NJ08 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.64■□□□□ 0.57
MBD3L5A6NJ08 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MBD3L5A6NJ08 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MBD3L5A6NJ08 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MBD3L5A6NJ08 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.64■□□□□ 0.57
MBD3L5A6NJ08 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.64■□□□□ 0.57
MBD3L5A6NJ08 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.64■□□□□ 0.57
MBD3L5A6NJ08 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MBD3L5A6NJ08 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MBD3L5A6NJ08 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MBD3L5A6NJ08 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
MBD3L5A6NJ08 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
MBD3L5A6NJ08 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms