Protein–RNA interactions for Protein: A6NGH7

CCDC160, Coiled-coil domain-containing protein 160, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC160A6NGH7 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC160A6NGH7 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CCDC160A6NGH7 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CCDC160A6NGH7 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC160A6NGH7 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC160A6NGH7 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
CCDC160A6NGH7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC160A6NGH7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC160A6NGH7 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC160A6NGH7 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC160A6NGH7 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC160A6NGH7 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC160A6NGH7 KRT18P10-201ENST00000388836 1287 ntBASIC19.65■□□□□ 0.74
CCDC160A6NGH7 DUX4L29-201ENST00000425409 679 ntBASIC19.65■□□□□ 0.74
CCDC160A6NGH7 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC160A6NGH7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC160A6NGH7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC160A6NGH7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC160A6NGH7 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC160A6NGH7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC160A6NGH7 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC160A6NGH7 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.64■□□□□ 0.74
CCDC160A6NGH7 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.64■□□□□ 0.74
CCDC160A6NGH7 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CCDC160A6NGH7 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.64■□□□□ 0.73
CCDC160A6NGH7 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC160A6NGH7 AC025884.2-201ENST00000553429 711 ntBASIC19.64■□□□□ 0.73
CCDC160A6NGH7 AC120498.9-201ENST00000339021 3867 ntBASIC19.64■□□□□ 0.73
CCDC160A6NGH7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC160A6NGH7 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC160A6NGH7 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC160A6NGH7 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC160A6NGH7 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC160A6NGH7 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC160A6NGH7 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC160A6NGH7 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC160A6NGH7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC160A6NGH7 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC160A6NGH7 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC160A6NGH7 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC160A6NGH7 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC160A6NGH7 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC160A6NGH7 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CCDC160A6NGH7 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CCDC160A6NGH7 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CCDC160A6NGH7 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC160A6NGH7 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC160A6NGH7 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC160A6NGH7 DUX4L13-201ENST00000554103 1267 ntBASIC19.63■□□□□ 0.73
CCDC160A6NGH7 DUX4L15-201ENST00000611059 1267 ntBASIC19.63■□□□□ 0.73
CCDC160A6NGH7 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC160A6NGH7 DUX4L23-201ENST00000615195 1269 ntBASIC19.63■□□□□ 0.73
CCDC160A6NGH7 DUX4L24-201ENST00000617576 1269 ntBASIC19.63■□□□□ 0.73
CCDC160A6NGH7 DUX4L22-201ENST00000618238 1269 ntBASIC19.63■□□□□ 0.73
CCDC160A6NGH7 DUX4L20-201ENST00000619712 1269 ntBASIC19.63■□□□□ 0.73
CCDC160A6NGH7 DUX4L21-201ENST00000622058 1269 ntBASIC19.63■□□□□ 0.73
CCDC160A6NGH7 DUX4L10-201ENST00000622460 1267 ntBASIC19.63■□□□□ 0.73
CCDC160A6NGH7 DUX4L25-201ENST00000624915 1269 ntBASIC19.63■□□□□ 0.73
CCDC160A6NGH7 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC160A6NGH7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC160A6NGH7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CCDC160A6NGH7 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC160A6NGH7 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC160A6NGH7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC160A6NGH7 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC160A6NGH7 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC160A6NGH7 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC160A6NGH7 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC160A6NGH7 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
CCDC160A6NGH7 AC018445.3-201ENST00000624177 1945 ntBASIC19.62■□□□□ 0.73
CCDC160A6NGH7 GABARAPL3-202ENST00000624044 1851 ntBASIC19.62■□□□□ 0.73
CCDC160A6NGH7 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC160A6NGH7 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC160A6NGH7 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC160A6NGH7 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC160A6NGH7 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC160A6NGH7 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC160A6NGH7 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC160A6NGH7 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CCDC160A6NGH7 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC160A6NGH7 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC160A6NGH7 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC160A6NGH7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
CCDC160A6NGH7 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC160A6NGH7 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC160A6NGH7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC160A6NGH7 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC160A6NGH7 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC160A6NGH7 BOD1-206ENST00000480951 814 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC160A6NGH7 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC160A6NGH7 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CCDC160A6NGH7 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC160A6NGH7 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC160A6NGH7 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC160A6NGH7 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC160A6NGH7 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC160A6NGH7 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
CCDC160A6NGH7 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC160A6NGH7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC160A6NGH7 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms