Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
SBNO1A3KN83 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC28.96■■■□□ 2.23
SBNO1A3KN83 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
SBNO1A3KN83 PBX1-209ENST00000485769 834 ntTSL 2 BASIC28.96■■■□□ 2.23
SBNO1A3KN83 RHOD-202ENST00000532559 538 ntTSL 3 BASIC28.96■■■□□ 2.23
SBNO1A3KN83 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC28.95■■■□□ 2.23
SBNO1A3KN83 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
SBNO1A3KN83 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
SBNO1A3KN83 SERPINH1P1-201ENST00000419794 1249 ntBASIC28.95■■■□□ 2.22
SBNO1A3KN83 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC28.95■■■□□ 2.22
SBNO1A3KN83 CD44-222ENST00000526025 1052 ntTSL 2 BASIC28.95■■■□□ 2.22
SBNO1A3KN83 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC28.95■■■□□ 2.22
SBNO1A3KN83 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC28.95■■■□□ 2.22
SBNO1A3KN83 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
SBNO1A3KN83 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
SBNO1A3KN83 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC28.94■■■□□ 2.22
SBNO1A3KN83 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC28.94■■■□□ 2.22
SBNO1A3KN83 THRA-202ENST00000394121 2260 ntTSL 2 BASIC28.94■■■□□ 2.22
SBNO1A3KN83 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
SBNO1A3KN83 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
SBNO1A3KN83 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC28.94■■■□□ 2.22
SBNO1A3KN83 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
SBNO1A3KN83 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
SBNO1A3KN83 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC28.94■■■□□ 2.22
SBNO1A3KN83 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
SBNO1A3KN83 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC28.93■■■□□ 2.22
SBNO1A3KN83 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC28.93■■■□□ 2.22
SBNO1A3KN83 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
SBNO1A3KN83 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC28.93■■■□□ 2.22
SBNO1A3KN83 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC28.93■■■□□ 2.22
SBNO1A3KN83 AC008403.3-201ENST00000598924 454 ntBASIC28.93■■■□□ 2.22
SBNO1A3KN83 AL359736.2-201ENST00000621992 437 ntBASIC28.93■■■□□ 2.22
SBNO1A3KN83 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC28.93■■■□□ 2.22
SBNO1A3KN83 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC28.93■■■□□ 2.22
SBNO1A3KN83 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
SBNO1A3KN83 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
SBNO1A3KN83 PEX7-202ENST00000367756 680 ntTSL 3 BASIC28.92■■■□□ 2.22
SBNO1A3KN83 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
SBNO1A3KN83 UBE2SP1-201ENST00000450587 669 ntBASIC28.92■■■□□ 2.22
SBNO1A3KN83 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC28.92■■■□□ 2.22
SBNO1A3KN83 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
SBNO1A3KN83 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
SBNO1A3KN83 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC28.92■■■□□ 2.22
SBNO1A3KN83 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
SBNO1A3KN83 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
SBNO1A3KN83 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC28.91■■■□□ 2.22
SBNO1A3KN83 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
SBNO1A3KN83 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
SBNO1A3KN83 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC28.91■■■□□ 2.22
SBNO1A3KN83 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC28.91■■■□□ 2.22
SBNO1A3KN83 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC28.91■■■□□ 2.22
SBNO1A3KN83 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC28.91■■■□□ 2.22
SBNO1A3KN83 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC28.91■■■□□ 2.22
SBNO1A3KN83 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC28.9■■■□□ 2.22
SBNO1A3KN83 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC28.9■■■□□ 2.22
SBNO1A3KN83 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC28.9■■■□□ 2.22
SBNO1A3KN83 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC28.9■■■□□ 2.22
SBNO1A3KN83 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC28.9■■■□□ 2.22
SBNO1A3KN83 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC28.9■■■□□ 2.22
SBNO1A3KN83 MME-217ENST00000616757 1315 ntTSL 5 BASIC28.9■■■□□ 2.22
SBNO1A3KN83 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC28.9■■■□□ 2.22
SBNO1A3KN83 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
SBNO1A3KN83 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC28.9■■■□□ 2.22
SBNO1A3KN83 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC28.9■■■□□ 2.22
SBNO1A3KN83 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
SBNO1A3KN83 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC28.89■■■□□ 2.22
SBNO1A3KN83 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC28.89■■■□□ 2.22
SBNO1A3KN83 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC28.89■■■□□ 2.22
SBNO1A3KN83 GATS-209ENST00000454084 1030 ntTSL 3 BASIC28.89■■■□□ 2.22
SBNO1A3KN83 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
SBNO1A3KN83 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
SBNO1A3KN83 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC28.89■■■□□ 2.22
SBNO1A3KN83 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
SBNO1A3KN83 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC28.89■■■□□ 2.21
SBNO1A3KN83 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC28.88■■■□□ 2.21
SBNO1A3KN83 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC28.88■■■□□ 2.21
SBNO1A3KN83 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC28.88■■■□□ 2.21
SBNO1A3KN83 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC28.88■■■□□ 2.21
SBNO1A3KN83 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC28.88■■■□□ 2.21
SBNO1A3KN83 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC28.88■■■□□ 2.21
SBNO1A3KN83 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
SBNO1A3KN83 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC28.88■■■□□ 2.21
SBNO1A3KN83 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
SBNO1A3KN83 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC28.88■■■□□ 2.21
SBNO1A3KN83 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC28.88■■■□□ 2.21
SBNO1A3KN83 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC28.88■■■□□ 2.21
SBNO1A3KN83 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC28.88■■■□□ 2.21
SBNO1A3KN83 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
SBNO1A3KN83 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC28.87■■■□□ 2.21
SBNO1A3KN83 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC28.87■■■□□ 2.21
SBNO1A3KN83 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
SBNO1A3KN83 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
SBNO1A3KN83 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC28.87■■■□□ 2.21
SBNO1A3KN83 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
SBNO1A3KN83 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC28.87■■■□□ 2.21
SBNO1A3KN83 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC28.87■■■□□ 2.21
SBNO1A3KN83 AC060766.5-201ENST00000590539 871 ntBASIC28.87■■■□□ 2.21
SBNO1A3KN83 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
SBNO1A3KN83 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
SBNO1A3KN83 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms