Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 AC092667.1-201ENST00000434301 2586 ntBASIC14.92□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 AC244015.2-201ENST00000616358 1861 ntBASIC14.91□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 UNC93B3-201ENST00000308076 687 ntBASIC14.91□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 MIR3181-201ENST00000578512 73 ntBASIC14.91□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC14.91□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC14.91□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC14.9□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 SERBP1P1-201ENST00000396021 1160 ntBASIC14.9□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 AC006455.2-201ENST00000429931 906 ntBASIC14.9□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 AC096631.2-201ENST00000436136 790 ntBASIC14.9□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC14.9□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 AL136162.1-201ENST00000607711 1078 ntBASIC14.9□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC14.9□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC14.9□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 AC133637.1-201ENST00000624115 1537 ntBASIC14.9□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 AC135279.3-201ENST00000610945 1311 ntBASIC14.9□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 AF106564.1-201ENST00000607058 2553 ntBASIC14.89□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 GTSE1-AS1-202ENST00000623117 1518 ntBASIC14.89□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 NALT1-201ENST00000429224 738 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 AC136469.2-201ENST00000623944 1028 ntBASIC14.89□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC14.88□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms