Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC127070.1-201ENST00000488441 484 ntBASIC11.69□□□□□ -0.54
LMO3Q8TAP4 RN7SL813P-201ENST00000489529 283 ntBASIC11.69□□□□□ -0.54
LMO3Q8TAP4 DUBR-204ENST00000490441 1149 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 AC093871.1-201ENST00000503815 534 ntTSL 2 BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 AC020893.2-201ENST00000506083 723 ntBASIC11.69□□□□□ -0.54
LMO3Q8TAP4 ASB5-205ENST00000512254 1036 ntTSL 2 BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 ACTBP2-201ENST00000515712 1123 ntBASIC11.69□□□□□ -0.54
LMO3Q8TAP4 IGKV1-35-201ENST00000517744 285 ntBASIC11.69□□□□□ -0.54
LMO3Q8TAP4 OR4A4P-201ENST00000532898 930 ntBASIC11.69□□□□□ -0.54
LMO3Q8TAP4 RPL12-205ENST00000536368 499 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 CALML3-AS1-203ENST00000545372 579 ntTSL 4 BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 OR7E47P-203ENST00000548970 984 ntBASIC11.69□□□□□ -0.54
LMO3Q8TAP4 CCDC32-205ENST00000558871 1075 ntTSL 2 BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 WASH3P-206ENST00000559884 427 ntTSL 5 BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 DNM1P38-201ENST00000560794 433 ntBASIC11.69□□□□□ -0.54
LMO3Q8TAP4 HNRNPA3P11-201ENST00000564298 934 ntBASIC11.69□□□□□ -0.54
LMO3Q8TAP4 AC006435.2-202ENST00000573007 442 ntTSL 3 BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 AC124283.1-201ENST00000576912 1190 ntBASIC11.69□□□□□ -0.54
LMO3Q8TAP4 AP003396.5-201ENST00000578216 632 ntTSL 5 BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 AC011731.1-201ENST00000585184 389 ntTSL 3 BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 HNRNPMP2-201ENST00000596369 599 ntBASIC11.69□□□□□ -0.54
LMO3Q8TAP4 CNFN-202ENST00000597255 502 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 AL669831.3-208ENST00000634337 891 ntTSL 5 BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 PAX6-238ENST00000638755 1161 ntTSL 5 BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 RABGAP1-213ENST00000616002 1595 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 ZSWIM1-201ENST00000372520 2168 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 STRADA-231ENST00000638708 2153 ntTSL 2 BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 COPS8-201ENST00000354371 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 TRAF3IP2-201ENST00000340026 2785 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 ZNF559-213ENST00000603380 3054 ntAPPRIS P3 TSL 2 BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 IMPDH1P3-201ENST00000399037 1549 ntBASIC11.69□□□□□ -0.54
LMO3Q8TAP4 EXOC7-221ENST00000634349 2124 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 DDR1-239ENST00000452441 3857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 POU6F1-201ENST00000333640 2960 ntTSL 5 BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 CREB3L4-201ENST00000271889 1750 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 LINC02002-201ENST00000578977 1481 ntTSL 2 BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 CCDC144A-204ENST00000360524 5830 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 MAGEB3-201ENST00000361644 2305 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 TTC12-219ENST00000529221 2315 ntAPPRIS P3 TSL 2 BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 ZNF185-209ENST00000449285 4328 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 MMADHC-201ENST00000303319 1436 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
LMO3Q8TAP4 SPIDR-206ENST00000518074 2819 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
LMO3Q8TAP4 DNTT-201ENST00000371174 1972 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
LMO3Q8TAP4 HSP90AB6P-201ENST00000426420 1980 ntBASIC11.68□□□□□ -0.54
LMO3Q8TAP4 CD300LF-204ENST00000361254 1689 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
LMO3Q8TAP4 ZNF135-204ENST00000506786 3349 ntTSL 2 BASIC11.68□□□□□ -0.54
LMO3Q8TAP4 COX18-201ENST00000295890 6846 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
LMO3Q8TAP4 CCDC173-203ENST00000447353 2181 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
LMO3Q8TAP4 AC006004.1-201ENST00000434887 2145 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LMO3Q8TAP4 AC093390.1-201ENST00000426976 3403 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LMO3Q8TAP4 RPA4-201ENST00000373040 1560 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
LMO3Q8TAP4 PSPN-202ENST00000597721 3911 ntBASIC11.68□□□□□ -0.54
LMO3Q8TAP4 PIPSL-201ENST00000480546 3350 ntBASIC11.68□□□□□ -0.54
LMO3Q8TAP4 CCDC120-207ENST00000606812 3857 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
LMO3Q8TAP4 CSPG4P1Y-201ENST00000306641 795 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LMO3Q8TAP4 CSPG4P2Y-201ENST00000306853 795 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LMO3Q8TAP4 GGNBP1-201ENST00000374458 960 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LMO3Q8TAP4 PTMA-204ENST00000409683 933 ntAPPRIS ALT1 TSL 3 BASIC11.68□□□□□ -0.54
LMO3Q8TAP4 STK16-205ENST00000409743 1069 ntTSL 5 BASIC11.68□□□□□ -0.54
LMO3Q8TAP4 RN7SKP259-201ENST00000411066 333 ntBASIC11.68□□□□□ -0.54
LMO3Q8TAP4 RPSAP13-201ENST00000415189 875 ntBASIC11.68□□□□□ -0.54
LMO3Q8TAP4 AL161740.1-201ENST00000417420 610 ntTSL 3 BASIC11.68□□□□□ -0.54
LMO3Q8TAP4 IGHV3OR16-10-201ENST00000425181 350 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
LMO3Q8TAP4 MIR3681HG-203ENST00000429878 558 ntTSL 2 BASIC11.68□□□□□ -0.54
LMO3Q8TAP4 AL512590.1-201ENST00000430691 821 ntBASIC11.68□□□□□ -0.54
LMO3Q8TAP4 AL357992.1-201ENST00000433442 130 ntTSL 2 BASIC11.68□□□□□ -0.54
LMO3Q8TAP4 AL513523.3-201ENST00000434575 316 ntTSL 2 BASIC11.68□□□□□ -0.54
LMO3Q8TAP4 PGAM3P-201ENST00000437662 427 ntBASIC11.68□□□□□ -0.54
LMO3Q8TAP4 AL450063.1-201ENST00000441775 244 ntBASIC11.68□□□□□ -0.54
LMO3Q8TAP4 PRAMEF35P-201ENST00000458709 891 ntBASIC11.68□□□□□ -0.54
LMO3Q8TAP4 RN7SL551P-201ENST00000480810 298 ntBASIC11.68□□□□□ -0.54
LMO3Q8TAP4 C21orf62-203ENST00000487113 1009 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LMO3Q8TAP4 RN7SL183P-201ENST00000488870 298 ntBASIC11.68□□□□□ -0.54
LMO3Q8TAP4 LYRM7-203ENST00000510516 604 ntTSL 2 BASIC11.68□□□□□ -0.54
LMO3Q8TAP4 CALCP-201ENST00000522108 212 ntBASIC11.68□□□□□ -0.54
LMO3Q8TAP4 AC004923.4-201ENST00000532296 739 ntTSL 3 BASIC11.68□□□□□ -0.54
LMO3Q8TAP4 SLC16A7-209ENST00000549465 537 ntTSL 3 BASIC11.68□□□□□ -0.54
LMO3Q8TAP4 FAM181A-AS1-201ENST00000554538 545 ntTSL 4 BASIC11.68□□□□□ -0.54
LMO3Q8TAP4 AC099668.1-201ENST00000563780 423 ntTSL 2 BASIC11.68□□□□□ -0.54
LMO3Q8TAP4 AC007342.1-201ENST00000565073 706 ntTSL 3 BASIC11.68□□□□□ -0.54
LMO3Q8TAP4 AOC4P-204ENST00000569586 565 ntTSL 4 BASIC11.68□□□□□ -0.54
LMO3Q8TAP4 RN7SL296P-201ENST00000585237 299 ntBASIC11.68□□□□□ -0.54
LMO3Q8TAP4 GGNBP1-206ENST00000618642 897 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LMO3Q8TAP4 AC024475.3-205ENST00000634991 481 ntTSL 3 BASIC11.68□□□□□ -0.54
LMO3Q8TAP4 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LMO3Q8TAP4 FAM196A-203ENST00000614311 4335 ntTSL 5 BASIC11.68□□□□□ -0.54
LMO3Q8TAP4 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LMO3Q8TAP4 NEFL-204ENST00000639464 3205 ntTSL 5 BASIC11.68□□□□□ -0.54
LMO3Q8TAP4 GOSR2-218ENST00000638634 3446 ntTSL 5 BASIC11.68□□□□□ -0.54
LMO3Q8TAP4 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
LMO3Q8TAP4 TCF21-202ENST00000367882 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LMO3Q8TAP4 ITIH4-202ENST00000406595 2872 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
LMO3Q8TAP4 CCDC172-201ENST00000333254 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LMO3Q8TAP4 WFIKKN2-201ENST00000311378 3588 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LMO3Q8TAP4 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC11.68□□□□□ -0.54
LMO3Q8TAP4 TMEM2-206ENST00000396272 1437 ntTSL 2 BASIC11.68□□□□□ -0.54
LMO3Q8TAP4 CHN2-202ENST00000409041 2375 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LMO3Q8TAP4 ENTPD3-201ENST00000301825 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms