Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 MELK-209ENST00000541717 2363 ntTSL 2 BASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 AL713866.1-201ENST00000563320 3125 ntBASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 DSCAML1-201ENST00000321322 6899 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 MSS51-202ENST00000372912 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 DDX39B-201ENST00000376177 1529 ntTSL 5 BASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 DDA1-201ENST00000359866 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 TXNL4B-201ENST00000268483 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 RBFOX1-224ENST00000641259 3651 ntBASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 RFX5-202ENST00000368870 2459 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 SMAD4-205ENST00000588745 1371 ntTSL 5 BASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 NCAM1-201ENST00000316851 5837 ntTSL 5 BASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 DCLK1-201ENST00000255448 5703 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 XRCC4-201ENST00000282268 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 ZNF433-203ENST00000419886 2322 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 FER1L6-AS1-201ENST00000518567 2315 ntTSL 2 BASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 CHRNB3-201ENST00000289957 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 N6AMT1-201ENST00000303775 4865 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 PRAMEF13-201ENST00000625019 1606 ntAPPRIS P5 TSL 5 BASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 ADGRF3-201ENST00000311519 3240 ntAPPRIS P4 TSL 1 (best) BASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 ABI1-204ENST00000376138 3503 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 ATP2A1-202ENST00000395503 3536 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 DLGAP1-218ENST00000581527 3525 ntTSL 2 BASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 IGHV1-2-201ENST00000390594 417 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 EIF4E2-204ENST00000409322 797 ntTSL 5 BASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 AL031727.2-201ENST00000416470 207 ntTSL 2 BASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 AC008268.1-201ENST00000425887 1119 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 OR7E110P-201ENST00000431186 574 ntBASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 AC068985.1-201ENST00000463297 703 ntTSL 5 BASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 MT1DP-202ENST00000486551 150 ntBASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 WDR45P1-201ENST00000502774 1082 ntBASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 C14orf159-208ENST00000517877 591 ntTSL 3 BASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 AC023078.1-201ENST00000524957 952 ntBASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 OR52P2P-201ENST00000527287 955 ntBASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 AC079329.1-201ENST00000527288 500 ntTSL 3 BASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 AC108471.2-202ENST00000529094 498 ntTSL 5 BASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 TRPT1-215ENST00000546089 684 ntTSL 3 BASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 AC011595.2-201ENST00000546640 1110 ntBASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 AL589743.2-201ENST00000547821 602 ntBASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 PYM1-207ENST00000557259 775 ntTSL 2 BASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 AC012236.1-201ENST00000560812 680 ntTSL 3 BASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 AC010551.3-201ENST00000563772 463 ntTSL 5 BASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 AC092338.1-201ENST00000566764 423 ntTSL 5 BASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 TP53TG3GP-201ENST00000567602 334 ntBASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 AC015688.5-201ENST00000584605 603 ntAPPRIS P5 TSL 2 BASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 AP005264.6-201ENST00000592801 414 ntTSL 2 BASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 POU5F1-208ENST00000620031 573 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 MED15P1-202ENST00000620166 906 ntBASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 AL359741.1-201ENST00000621262 225 ntBASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 TSPAN16-206ENST00000621731 642 ntTSL 2 BASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 PCDHB2-205ENST00000625033 519 ntTSL 4 BASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 AC007241.1-202ENST00000641637 835 ntBASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 PLSCR1-201ENST00000342435 2233 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 SERPINA3-201ENST00000393078 1589 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 CYP8B1-202ENST00000437102 1896 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 CD44-201ENST00000263398 4589 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 PRAMEF11-201ENST00000619922 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 ACSBG2-202ENST00000586696 2739 ntAPPRIS P3 TSL 2 BASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 DNAJC2-204ENST00000412522 3033 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 AC022148.1-201ENST00000316807 3267 ntTSL 2 BASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 GABRA5-201ENST00000335625 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 RAB39B-201ENST00000369454 3505 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 PAQR8-201ENST00000360726 4655 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 RIMS2-202ENST00000339750 3780 ntTSL 3 BASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 SUPT5H-201ENST00000359191 3770 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 PPFIA2-211ENST00000548586 4033 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 WDR37-202ENST00000358220 4582 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 MYOZ3-201ENST00000297130 3445 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 FPR2-201ENST00000340023 2262 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 ABCA8-201ENST00000269080 5677 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
NPIPA3F8WFD2 ZNF625-203ENST00000455799 1678 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
NPIPA3F8WFD2 FKBP4P7-201ENST00000433874 1363 ntBASIC10.15□□□□□ -0.78
NPIPA3F8WFD2 RNF10-201ENST00000325954 3825 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
NPIPA3F8WFD2 AP3B2-202ENST00000535348 3254 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
NPIPA3F8WFD2 FP565260.1-201ENST00000617716 3264 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
NPIPA3F8WFD2 SLC45A4-201ENST00000024061 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
NPIPA3F8WFD2 ST6GALNAC5-202ENST00000477717 3751 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
NPIPA3F8WFD2 AL445471.2-201ENST00000568143 2443 ntBASIC10.15□□□□□ -0.78
NPIPA3F8WFD2 MBLAC2-201ENST00000316610 4280 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
NPIPA3F8WFD2 DRC7-203ENST00000394337 2906 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
NPIPA3F8WFD2 HDAC6-203ENST00000376619 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
NPIPA3F8WFD2 CSMD2-204ENST00000373380 4379 ntTSL 2 BASIC10.15□□□□□ -0.78
NPIPA3F8WFD2 OR9Q2-201ENST00000311591 1085 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
NPIPA3F8WFD2 PRSS1-201ENST00000311737 800 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
NPIPA3F8WFD2 AC005037.1-202ENST00000332935 820 ntTSL 3 BASIC10.15□□□□□ -0.78
NPIPA3F8WFD2 UBE2A-201ENST00000346330 718 ntAPPRIS ALT1 TSL 5 BASIC10.15□□□□□ -0.78
NPIPA3F8WFD2 RNA5SP370-201ENST00000362545 121 ntBASIC10.15□□□□□ -0.78
NPIPA3F8WFD2 AL669818.1-201ENST00000440419 607 ntBASIC10.15□□□□□ -0.78
NPIPA3F8WFD2 COMMD9-203ENST00000452374 917 ntTSL 2 BASIC10.15□□□□□ -0.78
NPIPA3F8WFD2 GSG1-205ENST00000457134 1183 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.78
NPIPA3F8WFD2 AC004224.1-201ENST00000459875 568 ntBASIC10.15□□□□□ -0.78
NPIPA3F8WFD2 AF107885.1-201ENST00000498401 958 ntBASIC10.15□□□□□ -0.78
NPIPA3F8WFD2 AC090559.1-202ENST00000532943 851 ntTSL 3 BASIC10.15□□□□□ -0.78
NPIPA3F8WFD2 AL691403.1-201ENST00000553510 678 ntTSL 2 BASIC10.15□□□□□ -0.78
NPIPA3F8WFD2 BOLA2P2-201ENST00000603861 250 ntBASIC10.15□□□□□ -0.78
NPIPA3F8WFD2 pRNA.10-201ENST00000613590 89 ntBASIC10.15□□□□□ -0.78
NPIPA3F8WFD2 SLIRP-212ENST00000613856 420 ntAPPRIS ALT1 TSL 2 BASIC10.15□□□□□ -0.78
NPIPA3F8WFD2 AC121247.1-201ENST00000622888 1232 ntBASIC10.15□□□□□ -0.78
NPIPA3F8WFD2 AC148477.7-201ENST00000623871 428 ntBASIC10.15□□□□□ -0.78
NPIPA3F8WFD2 IL20RB-201ENST00000329582 2047 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
NPIPA3F8WFD2 AC006372.3-201ENST00000444158 4049 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 635.9 ms