RNA–Protein interactions for RNA: ENST00000548586.5

PPFIA2-211, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPFIA2, Length 4,033 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-211ENST00000548586 NISCHQ9Y2I1 1504 aa21.57■■□□□ 1.04
PPFIA2-211ENST00000548586 SHROOM4Q9ULL8 1493 aa19.72■□□□□ 0.75
PPFIA2-211ENST00000548586 SUPT5HO00267 1087 aaKnown RBP19.69■□□□□ 0.74
PPFIA2-211ENST00000548586 DCAF8L2P0C7V8 631 aa19.29■□□□□ 0.68
PPFIA2-211ENST00000548586 PCGF6Q9BYE7 350 aa19.08■□□□□ 0.65
PPFIA2-211ENST00000548586 HRCP23327 699 aa18.95■□□□□ 0.62
PPFIA2-211ENST00000548586 CHIC1Q5VXU3 224 aa18.78■□□□□ 0.6
PPFIA2-211ENST00000548586 PPARGC1BQ86YN6 1023 aaKnown RBP18.78■□□□□ 0.6
PPFIA2-211ENST00000548586 LOC105371045A0A1W2PR82 267 aa18.56■□□□□ 0.56
PPFIA2-211ENST00000548586 EHMT2Q96KQ7 1210 aa18.49■□□□□ 0.55
PPFIA2-211ENST00000548586 MYO15BQ96JP2 1530 aa18.48■□□□□ 0.55
PPFIA2-211ENST00000548586 FAM9AQ8IZU1 332 aaPredicted RBP18.34■□□□□ 0.53
PPFIA2-211ENST00000548586 TRIM26Q12899 539 aaPredicted RBP18.3■□□□□ 0.52
PPFIA2-211ENST00000548586 ZCCHC6Q5VYS8 1495 aaKnown RBP18.19■□□□□ 0.5
PPFIA2-211ENST00000548586 TRIM41Q8WV44 630 aa18.12■□□□□ 0.49
PPFIA2-211ENST00000548586 ZEB1P37275 1124 aaPredicted RBP18.1■□□□□ 0.49
PPFIA2-211ENST00000548586 DCAF1Q9Y4B6 1507 aa18■□□□□ 0.47
PPFIA2-211ENST00000548586 PELP1Q8IZL8 1130 aaKnown RBP17.97■□□□□ 0.47
PPFIA2-211ENST00000548586 TTBK1Q5TCY1 1321 aaPredicted RBP17.94■□□□□ 0.46
PPFIA2-211ENST00000548586 CCER1Q8TC90 406 aaPredicted RBP17.86■□□□□ 0.45
PPFIA2-211ENST00000548586 SCAF1Q9H7N4 1312 aaKnown RBP17.77■□□□□ 0.44
PPFIA2-211ENST00000548586 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.76■□□□□ 0.43
PPFIA2-211ENST00000548586 CCDC180Q9P1Z9 1646 aa17.68■□□□□ 0.42
PPFIA2-211ENST00000548586 CENPBP07199 599 aaPredicted RBP17.65■□□□□ 0.42
PPFIA2-211ENST00000548586 YTHDC1Q96MU7 727 aaKnown RBP17.58■□□□□ 0.4
PPFIA2-211ENST00000548586 DIEXFQ68CQ4 756 aaKnown RBP17.54■□□□□ 0.4
PPFIA2-211ENST00000548586 GTF3C3Q9Y5Q9 886 aa17.53■□□□□ 0.4
PPFIA2-211ENST00000548586 ACIN1Q9UKV3 1341 aaKnown RBP17.52■□□□□ 0.4
PPFIA2-211ENST00000548586 NEUROD1Q13562 356 aa17.5■□□□□ 0.39
PPFIA2-211ENST00000548586 RSF1Q96T23 1441 aaPredicted RBP17.41■□□□□ 0.38
PPFIA2-211ENST00000548586 UBTFP17480 764 aaKnown RBP17.4■□□□□ 0.38
PPFIA2-211ENST00000548586 SCRIBQ14160 1630 aa17.33■□□□□ 0.37
PPFIA2-211ENST00000548586 RANGAP1P46060 587 aaPredicted RBP17.32■□□□□ 0.36
PPFIA2-211ENST00000548586 HNRNPUL2Q1KMD3 747 aaKnown RBP17.27■□□□□ 0.36
PPFIA2-211ENST00000548586 APLP2Q06481 763 aa17.22■□□□□ 0.35
PPFIA2-211ENST00000548586 MYT1Q01538 1121 aa17.2■□□□□ 0.34
PPFIA2-211ENST00000548586 RB1CC1Q8TDY2 1594 aa17.19■□□□□ 0.34
PPFIA2-211ENST00000548586 ZNF316A6NFI3 1004 aaPredicted RBP17.18■□□□□ 0.34
PPFIA2-211ENST00000548586 ABCC9O60706 1549 aa17.17■□□□□ 0.34
PPFIA2-211ENST00000548586 CECR2Q9BXF3 1484 aa17.05■□□□□ 0.32
PPFIA2-211ENST00000548586 MIER1Q8N108 512 aa17.03■□□□□ 0.32
PPFIA2-211ENST00000548586 CSRNP3Q8WYN3 585 aa16.99■□□□□ 0.31
PPFIA2-211ENST00000548586 CEP162Q5TB80 1403 aa16.93■□□□□ 0.3
PPFIA2-211ENST00000548586 MROH2BQ7Z745 1585 aa16.9■□□□□ 0.3
PPFIA2-211ENST00000548586 ITGAEP38570 1179 aa16.86■□□□□ 0.29
PPFIA2-211ENST00000548586 SOGA1O94964 1423 aa16.81■□□□□ 0.28
PPFIA2-211ENST00000548586 CCDC88BA6NC98 1476 aa16.79■□□□□ 0.28
PPFIA2-211ENST00000548586 ABCC8Q09428 1581 aa16.77■□□□□ 0.28
PPFIA2-211ENST00000548586 WIZO95785 1651 aa16.77■□□□□ 0.27
PPFIA2-211ENST00000548586 TNIKQ9UKE5 1360 aa16.76■□□□□ 0.27
PPFIA2-211ENST00000548586 PABPN1Q86U42 306 aaKnown RBP eCLIP16.75■□□□□ 0.27
PPFIA2-211ENST00000548586 BCANQ96GW7 911 aa16.74■□□□□ 0.27
PPFIA2-211ENST00000548586 WRNQ14191 1432 aaPredicted RBP eCLIP16.65■□□□□ 0.26
PPFIA2-211ENST00000548586 RUSC2Q8N2Y8 1516 aa16.63■□□□□ 0.25
PPFIA2-211ENST00000548586 ATP1B4Q9UN42 357 aaPredicted RBP16.63■□□□□ 0.25
PPFIA2-211ENST00000548586 CLIP1P30622 1438 aa16.63■□□□□ 0.25
PPFIA2-211ENST00000548586 GOLGA3Q08378 1498 aa16.62■□□□□ 0.25
PPFIA2-211ENST00000548586 NEFLP07196 543 aa16.6■□□□□ 0.25
PPFIA2-211ENST00000548586 SUPT16HQ9Y5B9 1047 aaKnown RBP16.58■□□□□ 0.24
PPFIA2-211ENST00000548586 NACADO15069 1562 aa16.57■□□□□ 0.24
PPFIA2-211ENST00000548586 EEA1Q15075 1411 aa16.57■□□□□ 0.24
PPFIA2-211ENST00000548586 BAZ1AQ9NRL2 1556 aaPredicted RBP16.56■□□□□ 0.24
PPFIA2-211ENST00000548586 FKBP8Q14318 412 aa16.48■□□□□ 0.23
PPFIA2-211ENST00000548586 DDX10Q13206 875 aaKnown RBP16.46■□□□□ 0.23
PPFIA2-211ENST00000548586 CEP164Q9UPV0 1460 aa16.45■□□□□ 0.22
PPFIA2-211ENST00000548586 CLSPNQ9HAW4 1339 aa16.45■□□□□ 0.22
PPFIA2-211ENST00000548586 FAM50AQ14320 339 aaKnown RBP16.43■□□□□ 0.22
PPFIA2-211ENST00000548586 ERICH6Q7L0X2 663 aa16.41■□□□□ 0.22
PPFIA2-211ENST00000548586 HIRIP3Q9BW71 556 aaPredicted RBP16.41■□□□□ 0.22
PPFIA2-211ENST00000548586 VPS8Q8N3P4 1428 aa16.41■□□□□ 0.22
PPFIA2-211ENST00000548586 TOP2AP11388 1531 aaKnown RBP16.4■□□□□ 0.22
PPFIA2-211ENST00000548586 KCNH8Q96L42 1107 aa16.39■□□□□ 0.21
PPFIA2-211ENST00000548586 KANK4Q5T7N3 995 aaPredicted RBP16.39■□□□□ 0.21
PPFIA2-211ENST00000548586 TSHZ2Q9NRE2 1034 aa16.39■□□□□ 0.21
PPFIA2-211ENST00000548586 TRIM52Q96A61 297 aa16.38■□□□□ 0.21
PPFIA2-211ENST00000548586 ANP32EQ9BTT0 268 aa16.36■□□□□ 0.21
PPFIA2-211ENST00000548586 SMARCA2P51531 1590 aa16.32■□□□□ 0.2
PPFIA2-211ENST00000548586 DHX57Q6P158 1386 aaKnown RBP16.31■□□□□ 0.2
PPFIA2-211ENST00000548586 ANP32CO43423 234 aa16.31■□□□□ 0.2
PPFIA2-211ENST00000548586 RAPGEF2Q9Y4G8 1499 aa16.31■□□□□ 0.2
PPFIA2-211ENST00000548586 P3H3Q8IVL6 736 aa16.3■□□□□ 0.2
PPFIA2-211ENST00000548586 SIN3AQ96ST3 1273 aa16.27■□□□□ 0.2
PPFIA2-211ENST00000548586 SMARCA4P51532 1647 aa16.25■□□□□ 0.19
PPFIA2-211ENST00000548586 IRX6P78412 446 aaPredicted RBP16.21■□□□□ 0.19
PPFIA2-211ENST00000548586 CNGB1Q14028 1251 aaPredicted RBP16.21■□□□□ 0.19
PPFIA2-211ENST00000548586 CCNB3Q8WWL7 1395 aa16.19■□□□□ 0.18
PPFIA2-211ENST00000548586 EIF4G1Q04637 1599 aaKnown RBP16.18■□□□□ 0.18
PPFIA2-211ENST00000548586 HNRNPUQ00839 825 aaKnown RBP eCLIP16.15■□□□□ 0.18
PPFIA2-211ENST00000548586 BCL11AQ9H165 835 aa16.15■□□□□ 0.18
PPFIA2-211ENST00000548586 RBM19Q9Y4C8 960 aaKnown RBP16.14■□□□□ 0.17
PPFIA2-211ENST00000548586 CDK11AQ9UQ88 783 aaPredicted RBP16.13■□□□□ 0.17
PPFIA2-211ENST00000548586 KIF21BO75037 1637 aa16.12■□□□□ 0.17
PPFIA2-211ENST00000548586 RAB3GAP2Q9H2M9 1393 aa16.12■□□□□ 0.17
PPFIA2-211ENST00000548586 BAZ1BQ9UIG0 1483 aaKnown RBP16.11■□□□□ 0.17
PPFIA2-211ENST00000548586 SYNJ1O43426 1573 aa16.09■□□□□ 0.17
PPFIA2-211ENST00000548586 TONSLQ96HA7 1378 aa16.07■□□□□ 0.16
PPFIA2-211ENST00000548586 POLR3GLQ9BT43 218 aa16.06■□□□□ 0.16
PPFIA2-211ENST00000548586 KIF27Q86VH2 1401 aa16.02■□□□□ 0.16
PPFIA2-211ENST00000548586 SETD5Q9C0A6 1442 aa15.99■□□□□ 0.15
PPFIA2-211ENST00000548586 FAM9BQ8IZU0 186 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms