Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 KY-201ENST00000423778 2345 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 LRRD1-205ENST00000458448 2830 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 ARMC8-223ENST00000538260 4728 ntTSL 2 BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 GIGYF2-202ENST00000409196 5747 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 CUX1-202ENST00000292538 2930 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 VSTM5-202ENST00000409977 2969 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 GRIK1-204ENST00000399907 3472 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 AC091078.1-202ENST00000543286 2012 ntTSL 2 BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 ZAN-206ENST00000618565 8651 ntAPPRIS P4 TSL 5 BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 GAA-201ENST00000302262 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 ZMYND11-201ENST00000309776 4228 ntTSL 2 BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 MOCS1-203ENST00000373186 4256 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 TDG-201ENST00000266775 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 DEF8-229ENST00000617948 3883 ntAPPRIS P4 TSL 5 BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 ZNF19-205ENST00000564230 2205 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 ADCY5-201ENST00000309879 2841 ntTSL 2 BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 SLC7A5-203ENST00000565644 3983 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 ITGB6-204ENST00000409967 2292 ntTSL 3 BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 KRBA1-203ENST00000485033 3434 ntTSL 5 BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 MRPS35-203ENST00000538315 1715 ntTSL 2 BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 ALS2CL-203ENST00000415953 3471 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 SLC45A4-202ENST00000517878 3470 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 KIAA0895-202ENST00000317020 4241 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 PPIP5K1-206ENST00000381885 5596 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 ADAMTS7P3-201ENST00000566116 3716 ntBASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 PLEKHA1-202ENST00000368989 3771 ntTSL 5 BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 SCGB2B2-203ENST00000601241 2505 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 SGPL1-202ENST00000373202 5745 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 C12orf57-201ENST00000229281 560 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 CD300A-201ENST00000310828 631 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 LINC00469-201ENST00000321800 708 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 KRTAP4-8-202ENST00000333822 1161 ntAPPRIS P2 BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 THYN1-201ENST00000341541 1299 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 SETDB1-203ENST00000368963 1045 ntTSL 5 BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 AC246787.1-201ENST00000392301 627 ntBASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 THYN1-204ENST00000392595 893 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 CNIH1-202ENST00000395573 1233 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 U2AF1L4-203ENST00000412391 904 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 ZNF776-202ENST00000431353 549 ntTSL 4 BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 SMARCE1P2-201ENST00000442896 1219 ntBASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 AL138895.1-201ENST00000448674 173 ntTSL 3 BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 AC017006.1-201ENST00000450080 364 ntTSL 4 BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 RPSAP69-202ENST00000456555 883 ntBASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 AC010343.1-201ENST00000467270 629 ntBASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 ERICH6-AS1-203ENST00000475393 621 ntTSL 4 BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 MLF1-209ENST00000482628 1050 ntTSL 5 BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 RPSAP58-201ENST00000484897 888 ntBASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 MIR3945HG-201ENST00000510284 576 ntTSL 4 BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 AC008588.1-201ENST00000514867 462 ntTSL 3 BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 EIF1AD-207ENST00000529964 808 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 C12orf57-202ENST00000537087 662 ntTSL 2 BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 MEOX1-204ENST00000549132 1152 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 DYNLL1P2-201ENST00000554807 270 ntBASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 CNIH1-207ENST00000557690 838 ntTSL 3 BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 DOCK9-AS2-201ENST00000562781 807 ntBASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 RN7SL784P-201ENST00000577319 342 ntBASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 AC011731.1-201ENST00000585184 389 ntTSL 3 BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 AL603832.3-203ENST00000606505 813 ntAPPRIS P5 TSL 5 BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 RELN-201ENST00000343529 11565 ntAPPRIS P3 TSL 5 BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 RELN-202ENST00000424685 11571 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 RELN-203ENST00000428762 11571 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 PIGO-201ENST00000298004 2588 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 TACC2-206ENST00000368999 3879 ntTSL 5 BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 CLIP1-209ENST00000537178 5229 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 RAPGEF3-201ENST00000389212 3294 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 CHP1-201ENST00000334660 3329 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 MAGED2-204ENST00000375058 2048 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 CR2-202ENST00000367058 4063 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 HTR5A-AS1-201ENST00000395731 2703 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 SEPT10-203ENST00000397714 2719 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 HHAT-206ENST00000537898 3446 ntTSL 2 BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 GOT1L1-201ENST00000307599 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 HNRNPA1P6-202ENST00000631770 1447 ntBASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 RGL4-201ENST00000290691 2885 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 ABL2-211ENST00000512653 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 COL12A1-203ENST00000416123 8964 ntTSL 5 BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 SLC9A1-201ENST00000263980 4516 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 ZNF213-AS1-204ENST00000572691 3232 ntTSL 5 BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 HMOX2-202ENST00000398595 1644 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 SMPD4P2-201ENST00000440167 1634 ntBASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 ARAP1-205ENST00000426523 4066 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 ANKLE2-208ENST00000542282 3302 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 MYO18A-214ENST00000533112 7522 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 DLG1-201ENST00000346964 5034 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 MASP1-204ENST00000392470 1673 ntTSL 2 BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 LINC02267-201ENST00000513393 1687 ntTSL 3 BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 LINC00551-201ENST00000607593 1668 ntTSL 2 BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 FGD5P1-201ENST00000611158 3374 ntTSL 2 BASIC10.22□□□□□ -0.77
NPIPA3F8WFD2 PHKB-202ENST00000323584 4283 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
NPIPA3F8WFD2 SEC23B-204ENST00000377475 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
NPIPA3F8WFD2 LPIN1-203ENST00000396098 1761 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
NPIPA3F8WFD2 DDR1-232ENST00000418800 3588 ntAPPRIS P3 TSL 2 BASIC10.21□□□□□ -0.77
NPIPA3F8WFD2 SEC24C-201ENST00000339365 4513 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
NPIPA3F8WFD2 ACCSL-201ENST00000378832 1820 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
NPIPA3F8WFD2 EIF2A-214ENST00000487799 1913 ntTSL 2 BASIC10.21□□□□□ -0.77
NPIPA3F8WFD2 ZNF793-209ENST00000589319 1915 ntTSL 5 BASIC10.21□□□□□ -0.77
NPIPA3F8WFD2 FIRRE-201ENST00000427391 2926 ntTSL 2 BASIC10.21□□□□□ -0.77
NPIPA3F8WFD2 AC019322.4-201ENST00000623470 3930 ntBASIC10.21□□□□□ -0.77
NPIPA3F8WFD2 SNRNP35-203ENST00000526639 1975 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
NPIPA3F8WFD2 PCNP-204ENST00000469941 2028 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 1557.5 ms