Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
COMMD9Q9P000 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COMMD9Q9P000 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
COMMD9Q9P000 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
COMMD9Q9P000 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
COMMD9Q9P000 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COMMD9Q9P000 AC005703.6-201ENST00000623265 1329 ntBASIC17.98■□□□□ 0.47
COMMD9Q9P000 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
COMMD9Q9P000 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
COMMD9Q9P000 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
COMMD9Q9P000 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COMMD9Q9P000 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
COMMD9Q9P000 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
COMMD9Q9P000 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC17.97■□□□□ 0.47
COMMD9Q9P000 MIR6722-201ENST00000617286 78 ntBASIC17.97■□□□□ 0.47
COMMD9Q9P000 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.97■□□□□ 0.47
COMMD9Q9P000 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COMMD9Q9P000 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
COMMD9Q9P000 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
COMMD9Q9P000 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
COMMD9Q9P000 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
COMMD9Q9P000 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COMMD9Q9P000 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
COMMD9Q9P000 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COMMD9Q9P000 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
COMMD9Q9P000 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COMMD9Q9P000 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COMMD9Q9P000 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COMMD9Q9P000 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC17.96■□□□□ 0.47
COMMD9Q9P000 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC17.96■□□□□ 0.47
COMMD9Q9P000 SENP5-202ENST00000419026 973 ntTSL 3 BASIC17.96■□□□□ 0.47
COMMD9Q9P000 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COMMD9Q9P000 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC17.96■□□□□ 0.47
COMMD9Q9P000 AL031848.2-201ENST00000607670 837 ntBASIC17.96■□□□□ 0.47
COMMD9Q9P000 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC17.96■□□□□ 0.47
COMMD9Q9P000 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
COMMD9Q9P000 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
COMMD9Q9P000 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.96■□□□□ 0.47
COMMD9Q9P000 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
COMMD9Q9P000 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.47
COMMD9Q9P000 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
COMMD9Q9P000 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
COMMD9Q9P000 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
COMMD9Q9P000 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.95■□□□□ 0.46
COMMD9Q9P000 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
COMMD9Q9P000 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.95■□□□□ 0.46
COMMD9Q9P000 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COMMD9Q9P000 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC17.95■□□□□ 0.46
COMMD9Q9P000 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
COMMD9Q9P000 FP325331.1-202ENST00000623531 1380 ntBASIC17.95■□□□□ 0.46
COMMD9Q9P000 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COMMD9Q9P000 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.95■□□□□ 0.46
COMMD9Q9P000 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC17.95■□□□□ 0.46
COMMD9Q9P000 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC17.95■□□□□ 0.46
COMMD9Q9P000 AL033527.3-201ENST00000566366 1196 ntBASIC17.95■□□□□ 0.46
COMMD9Q9P000 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COMMD9Q9P000 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COMMD9Q9P000 KRT8P33-201ENST00000508125 1423 ntBASIC17.95■□□□□ 0.46
COMMD9Q9P000 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
COMMD9Q9P000 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COMMD9Q9P000 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COMMD9Q9P000 LINC01529-204ENST00000636474 1715 ntBASIC17.95■□□□□ 0.46
COMMD9Q9P000 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COMMD9Q9P000 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.95■□□□□ 0.46
COMMD9Q9P000 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
COMMD9Q9P000 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COMMD9Q9P000 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.94■□□□□ 0.46
COMMD9Q9P000 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COMMD9Q9P000 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COMMD9Q9P000 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COMMD9Q9P000 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COMMD9Q9P000 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.94■□□□□ 0.46
COMMD9Q9P000 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.94■□□□□ 0.46
COMMD9Q9P000 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
COMMD9Q9P000 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC17.94■□□□□ 0.46
COMMD9Q9P000 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC17.94■□□□□ 0.46
COMMD9Q9P000 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC17.94■□□□□ 0.46
COMMD9Q9P000 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.94■□□□□ 0.46
COMMD9Q9P000 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.94■□□□□ 0.46
COMMD9Q9P000 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.94■□□□□ 0.46
COMMD9Q9P000 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
COMMD9Q9P000 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COMMD9Q9P000 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COMMD9Q9P000 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
COMMD9Q9P000 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COMMD9Q9P000 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
COMMD9Q9P000 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
COMMD9Q9P000 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COMMD9Q9P000 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.93■□□□□ 0.46
COMMD9Q9P000 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.93■□□□□ 0.46
COMMD9Q9P000 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COMMD9Q9P000 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COMMD9Q9P000 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
COMMD9Q9P000 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
COMMD9Q9P000 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COMMD9Q9P000 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.93■□□□□ 0.46
COMMD9Q9P000 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COMMD9Q9P000 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
COMMD9Q9P000 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
COMMD9Q9P000 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms