Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.72■□□□□ 0.75
RLIMQ9NVW2 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RLIMQ9NVW2 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RLIMQ9NVW2 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
RLIMQ9NVW2 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RLIMQ9NVW2 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RLIMQ9NVW2 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RLIMQ9NVW2 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.72■□□□□ 0.75
RLIMQ9NVW2 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RLIMQ9NVW2 AP004607.7-201ENST00000527152 1677 ntBASIC19.71■□□□□ 0.75
RLIMQ9NVW2 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
RLIMQ9NVW2 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RLIMQ9NVW2 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RLIMQ9NVW2 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.71■□□□□ 0.75
RLIMQ9NVW2 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RLIMQ9NVW2 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RLIMQ9NVW2 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RLIMQ9NVW2 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.71■□□□□ 0.75
RLIMQ9NVW2 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.7■□□□□ 0.74
RLIMQ9NVW2 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RLIMQ9NVW2 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RLIMQ9NVW2 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RLIMQ9NVW2 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RLIMQ9NVW2 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RLIMQ9NVW2 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RLIMQ9NVW2 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
RLIMQ9NVW2 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RLIMQ9NVW2 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
RLIMQ9NVW2 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.7■□□□□ 0.74
RLIMQ9NVW2 PBX2P1-201ENST00000493219 1291 ntBASIC19.7■□□□□ 0.74
RLIMQ9NVW2 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.7■□□□□ 0.74
RLIMQ9NVW2 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
RLIMQ9NVW2 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RLIMQ9NVW2 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RLIMQ9NVW2 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RLIMQ9NVW2 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RLIMQ9NVW2 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
RLIMQ9NVW2 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.7■□□□□ 0.74
RLIMQ9NVW2 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.7■□□□□ 0.74
RLIMQ9NVW2 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.69■□□□□ 0.74
RLIMQ9NVW2 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RLIMQ9NVW2 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
RLIMQ9NVW2 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RLIMQ9NVW2 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RLIMQ9NVW2 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.69■□□□□ 0.74
RLIMQ9NVW2 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RLIMQ9NVW2 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RLIMQ9NVW2 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RLIMQ9NVW2 AC126544.1-201ENST00000580842 1059 ntBASIC19.69■□□□□ 0.74
RLIMQ9NVW2 AC008764.7-201ENST00000593779 1081 ntBASIC19.69■□□□□ 0.74
RLIMQ9NVW2 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RLIMQ9NVW2 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RLIMQ9NVW2 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RLIMQ9NVW2 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RLIMQ9NVW2 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RLIMQ9NVW2 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.69■□□□□ 0.74
RLIMQ9NVW2 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RLIMQ9NVW2 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RLIMQ9NVW2 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RLIMQ9NVW2 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RLIMQ9NVW2 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RLIMQ9NVW2 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.69■□□□□ 0.74
RLIMQ9NVW2 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
RLIMQ9NVW2 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RLIMQ9NVW2 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
RLIMQ9NVW2 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.68■□□□□ 0.74
RLIMQ9NVW2 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RLIMQ9NVW2 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
RLIMQ9NVW2 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RLIMQ9NVW2 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RLIMQ9NVW2 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.68■□□□□ 0.74
RLIMQ9NVW2 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.68■□□□□ 0.74
RLIMQ9NVW2 AC133561.4-201ENST00000566112 224 ntBASIC19.68■□□□□ 0.74
RLIMQ9NVW2 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RLIMQ9NVW2 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RLIMQ9NVW2 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.68■□□□□ 0.74
RLIMQ9NVW2 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.68■□□□□ 0.74
RLIMQ9NVW2 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.68■□□□□ 0.74
RLIMQ9NVW2 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
RLIMQ9NVW2 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RLIMQ9NVW2 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RLIMQ9NVW2 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.67■□□□□ 0.74
RLIMQ9NVW2 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RLIMQ9NVW2 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RLIMQ9NVW2 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RLIMQ9NVW2 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RLIMQ9NVW2 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
RLIMQ9NVW2 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.67■□□□□ 0.74
RLIMQ9NVW2 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.67■□□□□ 0.74
RLIMQ9NVW2 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.67■□□□□ 0.74
RLIMQ9NVW2 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RLIMQ9NVW2 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.67■□□□□ 0.74
RLIMQ9NVW2 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.67■□□□□ 0.74
RLIMQ9NVW2 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RLIMQ9NVW2 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.67■□□□□ 0.74
RLIMQ9NVW2 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RLIMQ9NVW2 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RLIMQ9NVW2 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RLIMQ9NVW2 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RLIMQ9NVW2 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms