Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
SDHAF3Q9NRP4 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SDHAF3Q9NRP4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SDHAF3Q9NRP4 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SDHAF3Q9NRP4 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.43■□□□□ 0.7
SDHAF3Q9NRP4 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.43■□□□□ 0.7
SDHAF3Q9NRP4 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SDHAF3Q9NRP4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SDHAF3Q9NRP4 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.42■□□□□ 0.7
SDHAF3Q9NRP4 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SDHAF3Q9NRP4 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.42■□□□□ 0.7
SDHAF3Q9NRP4 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SDHAF3Q9NRP4 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SDHAF3Q9NRP4 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SDHAF3Q9NRP4 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.42■□□□□ 0.7
SDHAF3Q9NRP4 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SDHAF3Q9NRP4 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.42■□□□□ 0.7
SDHAF3Q9NRP4 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.42■□□□□ 0.7
SDHAF3Q9NRP4 DUX4L2-201ENST00000561772 1275 ntBASIC19.42■□□□□ 0.7
SDHAF3Q9NRP4 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SDHAF3Q9NRP4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.42■□□□□ 0.7
SDHAF3Q9NRP4 DUX4L6-201ENST00000626483 1275 ntBASIC19.42■□□□□ 0.7
SDHAF3Q9NRP4 DUX4L1-201ENST00000627662 1275 ntBASIC19.42■□□□□ 0.7
SDHAF3Q9NRP4 DUX4L8-201ENST00000629013 1275 ntBASIC19.42■□□□□ 0.7
SDHAF3Q9NRP4 DUX4L3-201ENST00000630187 1275 ntBASIC19.42■□□□□ 0.7
SDHAF3Q9NRP4 DUX4L7-201ENST00000630678 1275 ntBASIC19.42■□□□□ 0.7
SDHAF3Q9NRP4 DUX4L5-201ENST00000630834 1275 ntBASIC19.42■□□□□ 0.7
SDHAF3Q9NRP4 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.42■□□□□ 0.7
SDHAF3Q9NRP4 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SDHAF3Q9NRP4 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SDHAF3Q9NRP4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SDHAF3Q9NRP4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.42■□□□□ 0.7
SDHAF3Q9NRP4 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SDHAF3Q9NRP4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SDHAF3Q9NRP4 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SDHAF3Q9NRP4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SDHAF3Q9NRP4 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.41■□□□□ 0.7
SDHAF3Q9NRP4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SDHAF3Q9NRP4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SDHAF3Q9NRP4 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SDHAF3Q9NRP4 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
SDHAF3Q9NRP4 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.41■□□□□ 0.7
SDHAF3Q9NRP4 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.41■□□□□ 0.7
SDHAF3Q9NRP4 AC003102.1-202ENST00000563394 1796 ntBASIC19.41■□□□□ 0.7
SDHAF3Q9NRP4 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SDHAF3Q9NRP4 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SDHAF3Q9NRP4 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SDHAF3Q9NRP4 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.41■□□□□ 0.7
SDHAF3Q9NRP4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SDHAF3Q9NRP4 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SDHAF3Q9NRP4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SDHAF3Q9NRP4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.4■□□□□ 0.7
SDHAF3Q9NRP4 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SDHAF3Q9NRP4 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.4■□□□□ 0.7
SDHAF3Q9NRP4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SDHAF3Q9NRP4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.4■□□□□ 0.7
SDHAF3Q9NRP4 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.4■□□□□ 0.7
SDHAF3Q9NRP4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SDHAF3Q9NRP4 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SDHAF3Q9NRP4 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SDHAF3Q9NRP4 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SDHAF3Q9NRP4 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.4■□□□□ 0.7
SDHAF3Q9NRP4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SDHAF3Q9NRP4 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SDHAF3Q9NRP4 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SDHAF3Q9NRP4 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SDHAF3Q9NRP4 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SDHAF3Q9NRP4 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SDHAF3Q9NRP4 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SDHAF3Q9NRP4 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SDHAF3Q9NRP4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.39■□□□□ 0.69
SDHAF3Q9NRP4 AC053503.5-201ENST00000601508 636 ntBASIC19.39■□□□□ 0.69
SDHAF3Q9NRP4 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SDHAF3Q9NRP4 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SDHAF3Q9NRP4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
SDHAF3Q9NRP4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.39■□□□□ 0.69
SDHAF3Q9NRP4 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SDHAF3Q9NRP4 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SDHAF3Q9NRP4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SDHAF3Q9NRP4 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SDHAF3Q9NRP4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SDHAF3Q9NRP4 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
SDHAF3Q9NRP4 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SDHAF3Q9NRP4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
SDHAF3Q9NRP4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
SDHAF3Q9NRP4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SDHAF3Q9NRP4 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SDHAF3Q9NRP4 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SDHAF3Q9NRP4 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SDHAF3Q9NRP4 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SDHAF3Q9NRP4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.38■□□□□ 0.69
SDHAF3Q9NRP4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.38■□□□□ 0.69
SDHAF3Q9NRP4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.38■□□□□ 0.69
SDHAF3Q9NRP4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.38■□□□□ 0.69
SDHAF3Q9NRP4 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SDHAF3Q9NRP4 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SDHAF3Q9NRP4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
SDHAF3Q9NRP4 NTF6G-201ENST00000591094 616 ntBASIC19.38■□□□□ 0.69
SDHAF3Q9NRP4 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.38■□□□□ 0.69
SDHAF3Q9NRP4 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms