Protein–RNA interactions for Protein: Q9HBV1

POPDC3, Popeye domain-containing protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POPDC3Q9HBV1 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.88■□□□□ 0.93
POPDC3Q9HBV1 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
POPDC3Q9HBV1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.88■□□□□ 0.93
POPDC3Q9HBV1 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
POPDC3Q9HBV1 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
POPDC3Q9HBV1 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.88■□□□□ 0.93
POPDC3Q9HBV1 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.88■□□□□ 0.93
POPDC3Q9HBV1 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.88■□□□□ 0.93
POPDC3Q9HBV1 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.88■□□□□ 0.93
POPDC3Q9HBV1 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
POPDC3Q9HBV1 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
POPDC3Q9HBV1 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
POPDC3Q9HBV1 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
POPDC3Q9HBV1 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
POPDC3Q9HBV1 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
POPDC3Q9HBV1 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.87■□□□□ 0.93
POPDC3Q9HBV1 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.87■□□□□ 0.93
POPDC3Q9HBV1 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
POPDC3Q9HBV1 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.87■□□□□ 0.93
POPDC3Q9HBV1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
POPDC3Q9HBV1 AC005224.4-201ENST00000583262 1652 ntBASIC20.87■□□□□ 0.93
POPDC3Q9HBV1 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
POPDC3Q9HBV1 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
POPDC3Q9HBV1 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
POPDC3Q9HBV1 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
POPDC3Q9HBV1 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.87■□□□□ 0.93
POPDC3Q9HBV1 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.87■□□□□ 0.93
POPDC3Q9HBV1 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.87■□□□□ 0.93
POPDC3Q9HBV1 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
POPDC3Q9HBV1 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
POPDC3Q9HBV1 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
POPDC3Q9HBV1 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.87■□□□□ 0.93
POPDC3Q9HBV1 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
POPDC3Q9HBV1 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.87■□□□□ 0.93
POPDC3Q9HBV1 AL049796.1-201ENST00000565336 1766 ntBASIC20.87■□□□□ 0.93
POPDC3Q9HBV1 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
POPDC3Q9HBV1 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
POPDC3Q9HBV1 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
POPDC3Q9HBV1 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
POPDC3Q9HBV1 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
POPDC3Q9HBV1 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.86■□□□□ 0.93
POPDC3Q9HBV1 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.86■□□□□ 0.93
POPDC3Q9HBV1 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
POPDC3Q9HBV1 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.86■□□□□ 0.93
POPDC3Q9HBV1 AF213884.3-201ENST00000563833 479 ntBASIC20.86■□□□□ 0.93
POPDC3Q9HBV1 AL031432.3-201ENST00000607698 485 ntBASIC20.86■□□□□ 0.93
POPDC3Q9HBV1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
POPDC3Q9HBV1 BX005040.4-201ENST00000637145 1518 ntBASIC20.86■□□□□ 0.93
POPDC3Q9HBV1 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
POPDC3Q9HBV1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.86■□□□□ 0.93
POPDC3Q9HBV1 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
POPDC3Q9HBV1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
POPDC3Q9HBV1 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
POPDC3Q9HBV1 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
POPDC3Q9HBV1 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
POPDC3Q9HBV1 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
POPDC3Q9HBV1 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
POPDC3Q9HBV1 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.85■□□□□ 0.93
POPDC3Q9HBV1 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
POPDC3Q9HBV1 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.85■□□□□ 0.93
POPDC3Q9HBV1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
POPDC3Q9HBV1 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
POPDC3Q9HBV1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
POPDC3Q9HBV1 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.85■□□□□ 0.93
POPDC3Q9HBV1 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.85■□□□□ 0.93
POPDC3Q9HBV1 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.85■□□□□ 0.93
POPDC3Q9HBV1 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
POPDC3Q9HBV1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
POPDC3Q9HBV1 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.84■□□□□ 0.93
POPDC3Q9HBV1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
POPDC3Q9HBV1 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
POPDC3Q9HBV1 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
POPDC3Q9HBV1 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
POPDC3Q9HBV1 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
POPDC3Q9HBV1 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
POPDC3Q9HBV1 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.84■□□□□ 0.93
POPDC3Q9HBV1 AL136967.2-201ENST00000623968 743 ntBASIC20.84■□□□□ 0.93
POPDC3Q9HBV1 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
POPDC3Q9HBV1 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
POPDC3Q9HBV1 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
POPDC3Q9HBV1 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
POPDC3Q9HBV1 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
POPDC3Q9HBV1 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
POPDC3Q9HBV1 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
POPDC3Q9HBV1 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.83■□□□□ 0.93
POPDC3Q9HBV1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.83■□□□□ 0.93
POPDC3Q9HBV1 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.83■□□□□ 0.93
POPDC3Q9HBV1 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.83■□□□□ 0.93
POPDC3Q9HBV1 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
POPDC3Q9HBV1 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
POPDC3Q9HBV1 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
POPDC3Q9HBV1 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
POPDC3Q9HBV1 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.82■□□□□ 0.92
POPDC3Q9HBV1 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
POPDC3Q9HBV1 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
POPDC3Q9HBV1 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.82■□□□□ 0.92
POPDC3Q9HBV1 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.82■□□□□ 0.92
POPDC3Q9HBV1 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
POPDC3Q9HBV1 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
POPDC3Q9HBV1 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms