Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.37■□□□□ 0.85
LRTM1Q9HBL6 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LRTM1Q9HBL6 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRTM1Q9HBL6 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRTM1Q9HBL6 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRTM1Q9HBL6 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRTM1Q9HBL6 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LRTM1Q9HBL6 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LRTM1Q9HBL6 AC024257.2-201ENST00000549699 147 ntBASIC20.36■□□□□ 0.85
LRTM1Q9HBL6 AC133561.4-201ENST00000566112 224 ntBASIC20.36■□□□□ 0.85
LRTM1Q9HBL6 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.36■□□□□ 0.85
LRTM1Q9HBL6 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
LRTM1Q9HBL6 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.36■□□□□ 0.85
LRTM1Q9HBL6 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LRTM1Q9HBL6 AL136162.1-201ENST00000607711 1078 ntBASIC20.36■□□□□ 0.85
LRTM1Q9HBL6 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.36■□□□□ 0.85
LRTM1Q9HBL6 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.36■□□□□ 0.85
LRTM1Q9HBL6 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LRTM1Q9HBL6 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.36■□□□□ 0.85
LRTM1Q9HBL6 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRTM1Q9HBL6 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRTM1Q9HBL6 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRTM1Q9HBL6 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LRTM1Q9HBL6 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
LRTM1Q9HBL6 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
LRTM1Q9HBL6 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRTM1Q9HBL6 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LRTM1Q9HBL6 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.35■□□□□ 0.85
LRTM1Q9HBL6 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
LRTM1Q9HBL6 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.35■□□□□ 0.85
LRTM1Q9HBL6 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRTM1Q9HBL6 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.35■□□□□ 0.85
LRTM1Q9HBL6 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRTM1Q9HBL6 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
LRTM1Q9HBL6 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
LRTM1Q9HBL6 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LRTM1Q9HBL6 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRTM1Q9HBL6 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LRTM1Q9HBL6 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.34■□□□□ 0.85
LRTM1Q9HBL6 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LRTM1Q9HBL6 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.34■□□□□ 0.85
LRTM1Q9HBL6 AC126544.1-201ENST00000580842 1059 ntBASIC20.34■□□□□ 0.85
LRTM1Q9HBL6 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
LRTM1Q9HBL6 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRTM1Q9HBL6 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.34■□□□□ 0.85
LRTM1Q9HBL6 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.34■□□□□ 0.85
LRTM1Q9HBL6 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LRTM1Q9HBL6 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRTM1Q9HBL6 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.33■□□□□ 0.85
LRTM1Q9HBL6 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LRTM1Q9HBL6 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LRTM1Q9HBL6 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.33■□□□□ 0.85
LRTM1Q9HBL6 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
LRTM1Q9HBL6 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LRTM1Q9HBL6 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LRTM1Q9HBL6 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
LRTM1Q9HBL6 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LRTM1Q9HBL6 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LRTM1Q9HBL6 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LRTM1Q9HBL6 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
LRTM1Q9HBL6 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
LRTM1Q9HBL6 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
LRTM1Q9HBL6 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.33■□□□□ 0.84
LRTM1Q9HBL6 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LRTM1Q9HBL6 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LRTM1Q9HBL6 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRTM1Q9HBL6 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRTM1Q9HBL6 AC135279.3-201ENST00000610945 1311 ntBASIC20.32■□□□□ 0.84
LRTM1Q9HBL6 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LRTM1Q9HBL6 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LRTM1Q9HBL6 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.32■□□□□ 0.84
LRTM1Q9HBL6 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LRTM1Q9HBL6 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LRTM1Q9HBL6 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.32■□□□□ 0.84
LRTM1Q9HBL6 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LRTM1Q9HBL6 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.32■□□□□ 0.84
LRTM1Q9HBL6 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRTM1Q9HBL6 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
LRTM1Q9HBL6 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LRTM1Q9HBL6 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LRTM1Q9HBL6 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRTM1Q9HBL6 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRTM1Q9HBL6 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRTM1Q9HBL6 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.32■□□□□ 0.84
LRTM1Q9HBL6 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
LRTM1Q9HBL6 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRTM1Q9HBL6 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
LRTM1Q9HBL6 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
LRTM1Q9HBL6 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRTM1Q9HBL6 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRTM1Q9HBL6 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.31■□□□□ 0.84
LRTM1Q9HBL6 IGHV3-19-201ENST00000521488 291 ntBASIC20.31■□□□□ 0.84
LRTM1Q9HBL6 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.31■□□□□ 0.84
LRTM1Q9HBL6 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRTM1Q9HBL6 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRTM1Q9HBL6 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LRTM1Q9HBL6 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LRTM1Q9HBL6 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.31■□□□□ 0.84
LRTM1Q9HBL6 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRTM1Q9HBL6 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms