Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.76■■□□□ 1.07
VIPAS39Q9H9C1 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.76■■□□□ 1.07
VIPAS39Q9H9C1 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
VIPAS39Q9H9C1 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
VIPAS39Q9H9C1 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.76■■□□□ 1.07
VIPAS39Q9H9C1 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.76■■□□□ 1.07
VIPAS39Q9H9C1 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.76■■□□□ 1.07
VIPAS39Q9H9C1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.76■■□□□ 1.07
VIPAS39Q9H9C1 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
VIPAS39Q9H9C1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
VIPAS39Q9H9C1 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VIPAS39Q9H9C1 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.76■■□□□ 1.07
VIPAS39Q9H9C1 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
VIPAS39Q9H9C1 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
VIPAS39Q9H9C1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
VIPAS39Q9H9C1 GPX1-201ENST00000419349 1106 ntBASIC21.75■■□□□ 1.07
VIPAS39Q9H9C1 PLK5-205ENST00000642079 1969 ntBASIC21.75■■□□□ 1.07
VIPAS39Q9H9C1 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VIPAS39Q9H9C1 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VIPAS39Q9H9C1 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
VIPAS39Q9H9C1 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
VIPAS39Q9H9C1 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VIPAS39Q9H9C1 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VIPAS39Q9H9C1 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.74■■□□□ 1.07
VIPAS39Q9H9C1 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.74■■□□□ 1.07
VIPAS39Q9H9C1 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
VIPAS39Q9H9C1 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VIPAS39Q9H9C1 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VIPAS39Q9H9C1 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VIPAS39Q9H9C1 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
VIPAS39Q9H9C1 MIR639-201ENST00000384974 98 ntBASIC21.74■■□□□ 1.07
VIPAS39Q9H9C1 SNX5-217ENST00000606557 1087 ntBASIC21.74■■□□□ 1.07
VIPAS39Q9H9C1 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
VIPAS39Q9H9C1 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
VIPAS39Q9H9C1 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.74■■□□□ 1.07
VIPAS39Q9H9C1 AC020907.5-201ENST00000624372 1936 ntBASIC21.74■■□□□ 1.07
VIPAS39Q9H9C1 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.74■■□□□ 1.07
VIPAS39Q9H9C1 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.74■■□□□ 1.07
VIPAS39Q9H9C1 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.74■■□□□ 1.07
VIPAS39Q9H9C1 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
VIPAS39Q9H9C1 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VIPAS39Q9H9C1 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VIPAS39Q9H9C1 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.73■■□□□ 1.07
VIPAS39Q9H9C1 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VIPAS39Q9H9C1 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
VIPAS39Q9H9C1 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VIPAS39Q9H9C1 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VIPAS39Q9H9C1 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VIPAS39Q9H9C1 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VIPAS39Q9H9C1 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
VIPAS39Q9H9C1 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VIPAS39Q9H9C1 KRT18P24-201ENST00000344739 1156 ntBASIC21.73■■□□□ 1.07
VIPAS39Q9H9C1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.73■■□□□ 1.07
VIPAS39Q9H9C1 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
VIPAS39Q9H9C1 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.73■■□□□ 1.07
VIPAS39Q9H9C1 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
VIPAS39Q9H9C1 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VIPAS39Q9H9C1 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.73■■□□□ 1.07
VIPAS39Q9H9C1 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
VIPAS39Q9H9C1 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VIPAS39Q9H9C1 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VIPAS39Q9H9C1 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
VIPAS39Q9H9C1 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
VIPAS39Q9H9C1 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VIPAS39Q9H9C1 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.72■■□□□ 1.07
VIPAS39Q9H9C1 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VIPAS39Q9H9C1 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
VIPAS39Q9H9C1 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
VIPAS39Q9H9C1 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VIPAS39Q9H9C1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.72■■□□□ 1.07
VIPAS39Q9H9C1 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.72■■□□□ 1.07
VIPAS39Q9H9C1 AL162377.1-201ENST00000618844 1793 ntBASIC21.71■■□□□ 1.07
VIPAS39Q9H9C1 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VIPAS39Q9H9C1 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
VIPAS39Q9H9C1 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VIPAS39Q9H9C1 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
VIPAS39Q9H9C1 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.71■■□□□ 1.07
VIPAS39Q9H9C1 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.71■■□□□ 1.07
VIPAS39Q9H9C1 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VIPAS39Q9H9C1 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VIPAS39Q9H9C1 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
VIPAS39Q9H9C1 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.71■■□□□ 1.07
VIPAS39Q9H9C1 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
VIPAS39Q9H9C1 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
VIPAS39Q9H9C1 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
VIPAS39Q9H9C1 OR7E47P-201ENST00000546390 1422 ntBASIC21.71■■□□□ 1.07
VIPAS39Q9H9C1 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
VIPAS39Q9H9C1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
VIPAS39Q9H9C1 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
VIPAS39Q9H9C1 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.7■■□□□ 1.06
VIPAS39Q9H9C1 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
VIPAS39Q9H9C1 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
VIPAS39Q9H9C1 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.7■■□□□ 1.06
VIPAS39Q9H9C1 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.7■■□□□ 1.06
VIPAS39Q9H9C1 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VIPAS39Q9H9C1 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VIPAS39Q9H9C1 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.7■■□□□ 1.06
VIPAS39Q9H9C1 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
VIPAS39Q9H9C1 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.7■■□□□ 1.06
VIPAS39Q9H9C1 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms