Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.53■■□□□ 1.04
LRRC40Q9H9A6 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.53■■□□□ 1.04
LRRC40Q9H9A6 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
LRRC40Q9H9A6 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.53■■□□□ 1.04
LRRC40Q9H9A6 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRRC40Q9H9A6 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
LRRC40Q9H9A6 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRRC40Q9H9A6 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.53■■□□□ 1.04
LRRC40Q9H9A6 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRRC40Q9H9A6 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRRC40Q9H9A6 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRRC40Q9H9A6 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRRC40Q9H9A6 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRRC40Q9H9A6 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRRC40Q9H9A6 BX005040.4-201ENST00000637145 1518 ntBASIC21.52■■□□□ 1.04
LRRC40Q9H9A6 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.52■■□□□ 1.04
LRRC40Q9H9A6 AC005229.4-201ENST00000610085 2198 ntBASIC21.52■■□□□ 1.04
LRRC40Q9H9A6 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRRC40Q9H9A6 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.52■■□□□ 1.04
LRRC40Q9H9A6 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRRC40Q9H9A6 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
LRRC40Q9H9A6 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
LRRC40Q9H9A6 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
LRRC40Q9H9A6 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
LRRC40Q9H9A6 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LRRC40Q9H9A6 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LRRC40Q9H9A6 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.51■■□□□ 1.03
LRRC40Q9H9A6 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LRRC40Q9H9A6 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
LRRC40Q9H9A6 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
LRRC40Q9H9A6 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.51■■□□□ 1.03
LRRC40Q9H9A6 AC142381.2-201ENST00000566120 298 ntBASIC21.51■■□□□ 1.03
LRRC40Q9H9A6 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LRRC40Q9H9A6 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
LRRC40Q9H9A6 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRRC40Q9H9A6 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRRC40Q9H9A6 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
LRRC40Q9H9A6 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
LRRC40Q9H9A6 FEM1AP4-201ENST00000443167 1987 ntBASIC21.5■■□□□ 1.03
LRRC40Q9H9A6 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRRC40Q9H9A6 AC005224.4-201ENST00000583262 1652 ntBASIC21.5■■□□□ 1.03
LRRC40Q9H9A6 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.5■■□□□ 1.03
LRRC40Q9H9A6 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.5■■□□□ 1.03
LRRC40Q9H9A6 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LRRC40Q9H9A6 AC055733.4-201ENST00000638462 1354 ntBASIC21.49■■□□□ 1.03
LRRC40Q9H9A6 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRRC40Q9H9A6 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRRC40Q9H9A6 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRRC40Q9H9A6 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.49■■□□□ 1.03
LRRC40Q9H9A6 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
LRRC40Q9H9A6 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.49■■□□□ 1.03
LRRC40Q9H9A6 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.49■■□□□ 1.03
LRRC40Q9H9A6 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRRC40Q9H9A6 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.49■■□□□ 1.03
LRRC40Q9H9A6 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.49■■□□□ 1.03
LRRC40Q9H9A6 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LRRC40Q9H9A6 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LRRC40Q9H9A6 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRRC40Q9H9A6 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRRC40Q9H9A6 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRRC40Q9H9A6 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRRC40Q9H9A6 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LRRC40Q9H9A6 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
LRRC40Q9H9A6 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRRC40Q9H9A6 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.48■■□□□ 1.03
LRRC40Q9H9A6 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.48■■□□□ 1.03
LRRC40Q9H9A6 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.48■■□□□ 1.03
LRRC40Q9H9A6 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.48■■□□□ 1.03
LRRC40Q9H9A6 AC012414.1-201ENST00000556676 535 ntBASIC21.48■■□□□ 1.03
LRRC40Q9H9A6 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LRRC40Q9H9A6 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.48■■□□□ 1.03
LRRC40Q9H9A6 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LRRC40Q9H9A6 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRRC40Q9H9A6 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.48■■□□□ 1.03
LRRC40Q9H9A6 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRRC40Q9H9A6 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRRC40Q9H9A6 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LRRC40Q9H9A6 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.47■■□□□ 1.03
LRRC40Q9H9A6 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.47■■□□□ 1.03
LRRC40Q9H9A6 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRRC40Q9H9A6 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRRC40Q9H9A6 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRRC40Q9H9A6 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LRRC40Q9H9A6 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.47■■□□□ 1.03
LRRC40Q9H9A6 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.47■■□□□ 1.03
LRRC40Q9H9A6 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRRC40Q9H9A6 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.47■■□□□ 1.03
LRRC40Q9H9A6 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.47■■□□□ 1.03
LRRC40Q9H9A6 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRRC40Q9H9A6 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRRC40Q9H9A6 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LRRC40Q9H9A6 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LRRC40Q9H9A6 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
LRRC40Q9H9A6 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
LRRC40Q9H9A6 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LRRC40Q9H9A6 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRRC40Q9H9A6 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.47■■□□□ 1.03
LRRC40Q9H9A6 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRRC40Q9H9A6 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRRC40Q9H9A6 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms