Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.58■□□□□ 0.89
SPTBN4Q9H254 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.58■□□□□ 0.89
SPTBN4Q9H254 HLA-L-211ENST00000482052 1765 ntBASIC20.58■□□□□ 0.89
SPTBN4Q9H254 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SPTBN4Q9H254 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SPTBN4Q9H254 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
SPTBN4Q9H254 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SPTBN4Q9H254 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
SPTBN4Q9H254 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.58■□□□□ 0.88
SPTBN4Q9H254 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.58■□□□□ 0.88
SPTBN4Q9H254 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.58■□□□□ 0.88
SPTBN4Q9H254 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.88
SPTBN4Q9H254 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SPTBN4Q9H254 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SPTBN4Q9H254 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
SPTBN4Q9H254 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SPTBN4Q9H254 AL355472.2-201ENST00000422958 438 ntBASIC20.57■□□□□ 0.88
SPTBN4Q9H254 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SPTBN4Q9H254 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.57■□□□□ 0.88
SPTBN4Q9H254 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SPTBN4Q9H254 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SPTBN4Q9H254 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.57■□□□□ 0.88
SPTBN4Q9H254 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.57■□□□□ 0.88
SPTBN4Q9H254 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SPTBN4Q9H254 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SPTBN4Q9H254 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.56■□□□□ 0.88
SPTBN4Q9H254 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.56■□□□□ 0.88
SPTBN4Q9H254 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SPTBN4Q9H254 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
SPTBN4Q9H254 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
SPTBN4Q9H254 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SPTBN4Q9H254 LSM12P1-201ENST00000411836 588 ntBASIC20.56■□□□□ 0.88
SPTBN4Q9H254 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SPTBN4Q9H254 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.56■□□□□ 0.88
SPTBN4Q9H254 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.56■□□□□ 0.88
SPTBN4Q9H254 GPALPP1-207ENST00000611650 899 ntBASIC20.56■□□□□ 0.88
SPTBN4Q9H254 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.56■□□□□ 0.88
SPTBN4Q9H254 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SPTBN4Q9H254 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SPTBN4Q9H254 OXCT2P1-201ENST00000447263 1535 ntBASIC20.55■□□□□ 0.88
SPTBN4Q9H254 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SPTBN4Q9H254 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SPTBN4Q9H254 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SPTBN4Q9H254 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SPTBN4Q9H254 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.55■□□□□ 0.88
SPTBN4Q9H254 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SPTBN4Q9H254 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SPTBN4Q9H254 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SPTBN4Q9H254 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SPTBN4Q9H254 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SPTBN4Q9H254 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.55■□□□□ 0.88
SPTBN4Q9H254 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.55■□□□□ 0.88
SPTBN4Q9H254 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.55■□□□□ 0.88
SPTBN4Q9H254 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SPTBN4Q9H254 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SPTBN4Q9H254 CRYGFP-201ENST00000418459 633 ntBASIC20.54■□□□□ 0.88
SPTBN4Q9H254 RARRES2P10-201ENST00000564312 460 ntBASIC20.54■□□□□ 0.88
SPTBN4Q9H254 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.54■□□□□ 0.88
SPTBN4Q9H254 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.54■□□□□ 0.88
SPTBN4Q9H254 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPTBN4Q9H254 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPTBN4Q9H254 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPTBN4Q9H254 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPTBN4Q9H254 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SPTBN4Q9H254 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.54■□□□□ 0.88
SPTBN4Q9H254 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.54■□□□□ 0.88
SPTBN4Q9H254 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.54■□□□□ 0.88
SPTBN4Q9H254 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPTBN4Q9H254 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.54■□□□□ 0.88
SPTBN4Q9H254 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.53■□□□□ 0.88
SPTBN4Q9H254 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPTBN4Q9H254 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.53■□□□□ 0.88
SPTBN4Q9H254 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
SPTBN4Q9H254 AC124016.1-201ENST00000609552 612 ntBASIC20.53■□□□□ 0.88
SPTBN4Q9H254 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPTBN4Q9H254 RBM17P2-201ENST00000616397 1405 ntBASIC20.53■□□□□ 0.88
SPTBN4Q9H254 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPTBN4Q9H254 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SPTBN4Q9H254 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.53■□□□□ 0.88
SPTBN4Q9H254 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.53■□□□□ 0.88
SPTBN4Q9H254 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
SPTBN4Q9H254 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.53■□□□□ 0.88
SPTBN4Q9H254 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SPTBN4Q9H254 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
SPTBN4Q9H254 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SPTBN4Q9H254 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.52■□□□□ 0.88
SPTBN4Q9H254 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
SPTBN4Q9H254 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.52■□□□□ 0.88
SPTBN4Q9H254 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.52■□□□□ 0.88
SPTBN4Q9H254 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SPTBN4Q9H254 AL591742.1-201ENST00000604433 565 ntBASIC20.52■□□□□ 0.88
SPTBN4Q9H254 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
SPTBN4Q9H254 KRT8P9-201ENST00000558927 1449 ntBASIC20.52■□□□□ 0.88
SPTBN4Q9H254 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SPTBN4Q9H254 AC005521.1-201ENST00000393351 872 ntBASIC20.52■□□□□ 0.88
SPTBN4Q9H254 AC239809.2-201ENST00000415381 517 ntBASIC20.52■□□□□ 0.88
SPTBN4Q9H254 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.52■□□□□ 0.88
SPTBN4Q9H254 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SPTBN4Q9H254 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.52■□□□□ 0.88
SPTBN4Q9H254 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms