Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB40CQ96S21 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB40CQ96S21 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB40CQ96S21 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB40CQ96S21 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB40CQ96S21 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
RAB40CQ96S21 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
RAB40CQ96S21 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB40CQ96S21 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB40CQ96S21 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
RAB40CQ96S21 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC17.15■□□□□ 0.34
RAB40CQ96S21 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB40CQ96S21 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB40CQ96S21 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB40CQ96S21 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB40CQ96S21 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB40CQ96S21 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RAB40CQ96S21 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB40CQ96S21 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB40CQ96S21 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB40CQ96S21 AC021242.3-201ENST00000607598 1377 ntBASIC17.15■□□□□ 0.34
RAB40CQ96S21 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.14■□□□□ 0.33
RAB40CQ96S21 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
RAB40CQ96S21 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB40CQ96S21 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RAB40CQ96S21 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB40CQ96S21 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.14■□□□□ 0.33
RAB40CQ96S21 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB40CQ96S21 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB40CQ96S21 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB40CQ96S21 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB40CQ96S21 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RAB40CQ96S21 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAB40CQ96S21 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB40CQ96S21 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB40CQ96S21 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.14■□□□□ 0.33
RAB40CQ96S21 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.14■□□□□ 0.33
RAB40CQ96S21 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAB40CQ96S21 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB40CQ96S21 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB40CQ96S21 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.14■□□□□ 0.33
RAB40CQ96S21 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB40CQ96S21 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.14■□□□□ 0.33
RAB40CQ96S21 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB40CQ96S21 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB40CQ96S21 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.13■□□□□ 0.33
RAB40CQ96S21 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RAB40CQ96S21 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB40CQ96S21 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC17.13■□□□□ 0.33
RAB40CQ96S21 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB40CQ96S21 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB40CQ96S21 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB40CQ96S21 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAB40CQ96S21 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB40CQ96S21 GABARAPL3-202ENST00000624044 1851 ntBASIC17.13■□□□□ 0.33
RAB40CQ96S21 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC17.13■□□□□ 0.33
RAB40CQ96S21 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB40CQ96S21 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAB40CQ96S21 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB40CQ96S21 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40CQ96S21 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40CQ96S21 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40CQ96S21 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40CQ96S21 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40CQ96S21 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40CQ96S21 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40CQ96S21 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40CQ96S21 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40CQ96S21 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40CQ96S21 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
RAB40CQ96S21 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40CQ96S21 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.12■□□□□ 0.33
RAB40CQ96S21 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40CQ96S21 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
RAB40CQ96S21 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40CQ96S21 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB40CQ96S21 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
RAB40CQ96S21 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40CQ96S21 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.12■□□□□ 0.33
RAB40CQ96S21 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
RAB40CQ96S21 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
RAB40CQ96S21 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40CQ96S21 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40CQ96S21 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40CQ96S21 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40CQ96S21 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40CQ96S21 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40CQ96S21 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40CQ96S21 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40CQ96S21 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40CQ96S21 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
RAB40CQ96S21 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RAB40CQ96S21 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
RAB40CQ96S21 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40CQ96S21 PRTG-204ENST00000561292 833 ntTSL 3 BASIC17.11■□□□□ 0.33
RAB40CQ96S21 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.11■□□□□ 0.33
RAB40CQ96S21 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
RAB40CQ96S21 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40CQ96S21 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RAB40CQ96S21 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms