Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.95■■□□□ 1.1
PRICKLE1Q96MT3 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.95■■□□□ 1.1
PRICKLE1Q96MT3 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PRICKLE1Q96MT3 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PRICKLE1Q96MT3 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.94■■□□□ 1.1
PRICKLE1Q96MT3 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PRICKLE1Q96MT3 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PRICKLE1Q96MT3 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.94■■□□□ 1.1
PRICKLE1Q96MT3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PRICKLE1Q96MT3 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.94■■□□□ 1.1
PRICKLE1Q96MT3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.94■■□□□ 1.1
PRICKLE1Q96MT3 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.94■■□□□ 1.1
PRICKLE1Q96MT3 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PRICKLE1Q96MT3 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PRICKLE1Q96MT3 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PRICKLE1Q96MT3 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PRICKLE1Q96MT3 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.94■■□□□ 1.1
PRICKLE1Q96MT3 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PRICKLE1Q96MT3 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
PRICKLE1Q96MT3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PRICKLE1Q96MT3 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.94■■□□□ 1.1
PRICKLE1Q96MT3 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PRICKLE1Q96MT3 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PRICKLE1Q96MT3 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
PRICKLE1Q96MT3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
PRICKLE1Q96MT3 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
PRICKLE1Q96MT3 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
PRICKLE1Q96MT3 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.93■■□□□ 1.1
PRICKLE1Q96MT3 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.93■■□□□ 1.1
PRICKLE1Q96MT3 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PRICKLE1Q96MT3 EEF1DP3-203ENST00000566025 782 ntBASIC21.93■■□□□ 1.1
PRICKLE1Q96MT3 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PRICKLE1Q96MT3 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.93■■□□□ 1.1
PRICKLE1Q96MT3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.92■■□□□ 1.1
PRICKLE1Q96MT3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PRICKLE1Q96MT3 FAM99A-202ENST00000538190 1989 ntBASIC21.92■■□□□ 1.1
PRICKLE1Q96MT3 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.92■■□□□ 1.1
PRICKLE1Q96MT3 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PRICKLE1Q96MT3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.92■■□□□ 1.1
PRICKLE1Q96MT3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PRICKLE1Q96MT3 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
PRICKLE1Q96MT3 AC016769.1-201ENST00000409132 1010 ntBASIC21.92■■□□□ 1.1
PRICKLE1Q96MT3 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.92■■□□□ 1.1
PRICKLE1Q96MT3 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.92■■□□□ 1.1
PRICKLE1Q96MT3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PRICKLE1Q96MT3 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PRICKLE1Q96MT3 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PRICKLE1Q96MT3 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.92■■□□□ 1.1
PRICKLE1Q96MT3 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.92■■□□□ 1.1
PRICKLE1Q96MT3 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PRICKLE1Q96MT3 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PRICKLE1Q96MT3 AC003102.1-202ENST00000563394 1796 ntBASIC21.92■■□□□ 1.1
PRICKLE1Q96MT3 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PRICKLE1Q96MT3 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
PRICKLE1Q96MT3 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PRICKLE1Q96MT3 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
PRICKLE1Q96MT3 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
PRICKLE1Q96MT3 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
PRICKLE1Q96MT3 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.91■■□□□ 1.1
PRICKLE1Q96MT3 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PRICKLE1Q96MT3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PRICKLE1Q96MT3 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PRICKLE1Q96MT3 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PRICKLE1Q96MT3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PRICKLE1Q96MT3 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PRICKLE1Q96MT3 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PRICKLE1Q96MT3 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PRICKLE1Q96MT3 AC010141.2-201ENST00000452426 721 ntBASIC21.9■■□□□ 1.1
PRICKLE1Q96MT3 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.9■■□□□ 1.1
PRICKLE1Q96MT3 AP001160.3-201ENST00000601484 763 ntBASIC21.9■■□□□ 1.1
PRICKLE1Q96MT3 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.9■■□□□ 1.1
PRICKLE1Q96MT3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PRICKLE1Q96MT3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PRICKLE1Q96MT3 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.9■■□□□ 1.1
PRICKLE1Q96MT3 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
PRICKLE1Q96MT3 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PRICKLE1Q96MT3 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PRICKLE1Q96MT3 AC138907.5-202ENST00000569484 235 ntBASIC21.89■■□□□ 1.09
PRICKLE1Q96MT3 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
PRICKLE1Q96MT3 RARRES2P11-201ENST00000635158 484 ntBASIC21.89■■□□□ 1.09
PRICKLE1Q96MT3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
PRICKLE1Q96MT3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.89■■□□□ 1.09
PRICKLE1Q96MT3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PRICKLE1Q96MT3 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.88■■□□□ 1.09
PRICKLE1Q96MT3 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PRICKLE1Q96MT3 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PRICKLE1Q96MT3 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.88■■□□□ 1.09
PRICKLE1Q96MT3 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PRICKLE1Q96MT3 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.88■■□□□ 1.09
PRICKLE1Q96MT3 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.88■■□□□ 1.09
PRICKLE1Q96MT3 AC053503.5-201ENST00000601508 636 ntBASIC21.88■■□□□ 1.09
PRICKLE1Q96MT3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PRICKLE1Q96MT3 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PRICKLE1Q96MT3 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PRICKLE1Q96MT3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PRICKLE1Q96MT3 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PRICKLE1Q96MT3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PRICKLE1Q96MT3 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
PRICKLE1Q96MT3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.87■■□□□ 1.09
PRICKLE1Q96MT3 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms