Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.68■□□□□ 0.9
ATL1Q8WXF7 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATL1Q8WXF7 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATL1Q8WXF7 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATL1Q8WXF7 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATL1Q8WXF7 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
ATL1Q8WXF7 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.68■□□□□ 0.9
ATL1Q8WXF7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.68■□□□□ 0.9
ATL1Q8WXF7 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.68■□□□□ 0.9
ATL1Q8WXF7 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATL1Q8WXF7 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATL1Q8WXF7 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.68■□□□□ 0.9
ATL1Q8WXF7 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATL1Q8WXF7 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATL1Q8WXF7 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATL1Q8WXF7 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.67■□□□□ 0.9
ATL1Q8WXF7 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATL1Q8WXF7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.67■□□□□ 0.9
ATL1Q8WXF7 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
ATL1Q8WXF7 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATL1Q8WXF7 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATL1Q8WXF7 AC055733.4-201ENST00000638462 1354 ntBASIC20.67■□□□□ 0.9
ATL1Q8WXF7 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.67■□□□□ 0.9
ATL1Q8WXF7 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
ATL1Q8WXF7 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
ATL1Q8WXF7 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.67■□□□□ 0.9
ATL1Q8WXF7 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
ATL1Q8WXF7 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.66■□□□□ 0.9
ATL1Q8WXF7 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
ATL1Q8WXF7 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATL1Q8WXF7 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.66■□□□□ 0.9
ATL1Q8WXF7 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.66■□□□□ 0.9
ATL1Q8WXF7 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.66■□□□□ 0.9
ATL1Q8WXF7 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATL1Q8WXF7 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATL1Q8WXF7 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
ATL1Q8WXF7 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATL1Q8WXF7 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.65■□□□□ 0.9
ATL1Q8WXF7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATL1Q8WXF7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.65■□□□□ 0.9
ATL1Q8WXF7 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ATL1Q8WXF7 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
ATL1Q8WXF7 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ATL1Q8WXF7 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.65■□□□□ 0.9
ATL1Q8WXF7 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.65■□□□□ 0.9
ATL1Q8WXF7 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.65■□□□□ 0.9
ATL1Q8WXF7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.65■□□□□ 0.9
ATL1Q8WXF7 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ATL1Q8WXF7 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATL1Q8WXF7 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATL1Q8WXF7 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.65■□□□□ 0.9
ATL1Q8WXF7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
ATL1Q8WXF7 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
ATL1Q8WXF7 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
ATL1Q8WXF7 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.64■□□□□ 0.9
ATL1Q8WXF7 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATL1Q8WXF7 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATL1Q8WXF7 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATL1Q8WXF7 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATL1Q8WXF7 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATL1Q8WXF7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
ATL1Q8WXF7 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATL1Q8WXF7 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
ATL1Q8WXF7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATL1Q8WXF7 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATL1Q8WXF7 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.63■□□□□ 0.89
ATL1Q8WXF7 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.63■□□□□ 0.89
ATL1Q8WXF7 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATL1Q8WXF7 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.63■□□□□ 0.89
ATL1Q8WXF7 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATL1Q8WXF7 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATL1Q8WXF7 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.63■□□□□ 0.89
ATL1Q8WXF7 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.63■□□□□ 0.89
ATL1Q8WXF7 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.63■□□□□ 0.89
ATL1Q8WXF7 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATL1Q8WXF7 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATL1Q8WXF7 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
ATL1Q8WXF7 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.62■□□□□ 0.89
ATL1Q8WXF7 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATL1Q8WXF7 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
ATL1Q8WXF7 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATL1Q8WXF7 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.62■□□□□ 0.89
ATL1Q8WXF7 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
ATL1Q8WXF7 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATL1Q8WXF7 SLC25A24-204ENST00000569674 2357 ntBASIC20.62■□□□□ 0.89
ATL1Q8WXF7 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.62■□□□□ 0.89
ATL1Q8WXF7 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
ATL1Q8WXF7 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.62■□□□□ 0.89
ATL1Q8WXF7 AC027612.3-201ENST00000413684 1047 ntBASIC20.62■□□□□ 0.89
ATL1Q8WXF7 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ATL1Q8WXF7 TPRG1LP1-201ENST00000598702 760 ntBASIC20.62■□□□□ 0.89
ATL1Q8WXF7 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.62■□□□□ 0.89
ATL1Q8WXF7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.62■□□□□ 0.89
ATL1Q8WXF7 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ATL1Q8WXF7 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATL1Q8WXF7 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.62■□□□□ 0.89
ATL1Q8WXF7 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.62■□□□□ 0.89
ATL1Q8WXF7 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.62■□□□□ 0.89
ATL1Q8WXF7 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATL1Q8WXF7 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms