Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LINC01560Q8TB33 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
LINC01560Q8TB33 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LINC01560Q8TB33 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LINC01560Q8TB33 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LINC01560Q8TB33 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LINC01560Q8TB33 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LINC01560Q8TB33 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.41■□□□□ 0.54
LINC01560Q8TB33 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LINC01560Q8TB33 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LINC01560Q8TB33 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LINC01560Q8TB33 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
LINC01560Q8TB33 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.41■□□□□ 0.54
LINC01560Q8TB33 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.41■□□□□ 0.54
LINC01560Q8TB33 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
LINC01560Q8TB33 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LINC01560Q8TB33 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
LINC01560Q8TB33 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LINC01560Q8TB33 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LINC01560Q8TB33 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.41■□□□□ 0.54
LINC01560Q8TB33 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LINC01560Q8TB33 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.4■□□□□ 0.54
LINC01560Q8TB33 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LINC01560Q8TB33 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.4■□□□□ 0.54
LINC01560Q8TB33 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LINC01560Q8TB33 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LINC01560Q8TB33 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.4■□□□□ 0.54
LINC01560Q8TB33 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LINC01560Q8TB33 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LINC01560Q8TB33 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.4■□□□□ 0.54
LINC01560Q8TB33 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.4■□□□□ 0.54
LINC01560Q8TB33 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
LINC01560Q8TB33 POU5F1P4-201ENST00000413175 1085 ntBASIC18.4■□□□□ 0.54
LINC01560Q8TB33 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.4■□□□□ 0.54
LINC01560Q8TB33 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.4■□□□□ 0.54
LINC01560Q8TB33 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LINC01560Q8TB33 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
LINC01560Q8TB33 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LINC01560Q8TB33 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
LINC01560Q8TB33 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.39■□□□□ 0.54
LINC01560Q8TB33 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
LINC01560Q8TB33 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LINC01560Q8TB33 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LINC01560Q8TB33 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LINC01560Q8TB33 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LINC01560Q8TB33 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.39■□□□□ 0.53
LINC01560Q8TB33 BX276092.2-201ENST00000417668 665 ntBASIC18.39■□□□□ 0.53
LINC01560Q8TB33 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LINC01560Q8TB33 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LINC01560Q8TB33 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.39■□□□□ 0.53
LINC01560Q8TB33 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LINC01560Q8TB33 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
LINC01560Q8TB33 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.39■□□□□ 0.53
LINC01560Q8TB33 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LINC01560Q8TB33 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.38■□□□□ 0.53
LINC01560Q8TB33 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
LINC01560Q8TB33 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.38■□□□□ 0.53
LINC01560Q8TB33 AL512625.2-201ENST00000417533 625 ntBASIC18.38■□□□□ 0.53
LINC01560Q8TB33 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.38■□□□□ 0.53
LINC01560Q8TB33 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.38■□□□□ 0.53
LINC01560Q8TB33 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.38■□□□□ 0.53
LINC01560Q8TB33 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.38■□□□□ 0.53
LINC01560Q8TB33 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.38■□□□□ 0.53
LINC01560Q8TB33 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.38■□□□□ 0.53
LINC01560Q8TB33 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.38■□□□□ 0.53
LINC01560Q8TB33 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
LINC01560Q8TB33 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.38■□□□□ 0.53
LINC01560Q8TB33 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
LINC01560Q8TB33 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LINC01560Q8TB33 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LINC01560Q8TB33 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC18.37■□□□□ 0.53
LINC01560Q8TB33 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
LINC01560Q8TB33 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.37■□□□□ 0.53
LINC01560Q8TB33 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LINC01560Q8TB33 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
LINC01560Q8TB33 POU5F1P3-201ENST00000428824 1078 ntBASIC18.37■□□□□ 0.53
LINC01560Q8TB33 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.37■□□□□ 0.53
LINC01560Q8TB33 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.37■□□□□ 0.53
LINC01560Q8TB33 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.37■□□□□ 0.53
LINC01560Q8TB33 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LINC01560Q8TB33 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LINC01560Q8TB33 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LINC01560Q8TB33 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.37■□□□□ 0.53
LINC01560Q8TB33 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.37■□□□□ 0.53
LINC01560Q8TB33 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LINC01560Q8TB33 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LINC01560Q8TB33 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LINC01560Q8TB33 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LINC01560Q8TB33 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
LINC01560Q8TB33 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LINC01560Q8TB33 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LINC01560Q8TB33 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LINC01560Q8TB33 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
LINC01560Q8TB33 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
LINC01560Q8TB33 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
LINC01560Q8TB33 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LINC01560Q8TB33 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.36■□□□□ 0.53
LINC01560Q8TB33 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LINC01560Q8TB33 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LINC01560Q8TB33 AC061975.6-201ENST00000579045 1553 ntBASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms