Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.26■□□□□ 0.83
ZNF248Q8NDW4 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.26■□□□□ 0.83
ZNF248Q8NDW4 AC008694.1-202ENST00000636953 945 ntBASIC20.26■□□□□ 0.83
ZNF248Q8NDW4 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF248Q8NDW4 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
ZNF248Q8NDW4 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF248Q8NDW4 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF248Q8NDW4 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF248Q8NDW4 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF248Q8NDW4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF248Q8NDW4 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.25■□□□□ 0.83
ZNF248Q8NDW4 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.25■□□□□ 0.83
ZNF248Q8NDW4 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF248Q8NDW4 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF248Q8NDW4 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.25■□□□□ 0.83
ZNF248Q8NDW4 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF248Q8NDW4 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.25■□□□□ 0.83
ZNF248Q8NDW4 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.25■□□□□ 0.83
ZNF248Q8NDW4 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.25■□□□□ 0.83
ZNF248Q8NDW4 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.25■□□□□ 0.83
ZNF248Q8NDW4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.25■□□□□ 0.83
ZNF248Q8NDW4 GCSHP5-201ENST00000443090 522 ntBASIC20.25■□□□□ 0.83
ZNF248Q8NDW4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
ZNF248Q8NDW4 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.25■□□□□ 0.83
ZNF248Q8NDW4 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF248Q8NDW4 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.25■□□□□ 0.83
ZNF248Q8NDW4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.25■□□□□ 0.83
ZNF248Q8NDW4 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF248Q8NDW4 AC068338.2-201ENST00000563278 1430 ntBASIC20.25■□□□□ 0.83
ZNF248Q8NDW4 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.25■□□□□ 0.83
ZNF248Q8NDW4 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
ZNF248Q8NDW4 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
ZNF248Q8NDW4 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.25■□□□□ 0.83
ZNF248Q8NDW4 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
ZNF248Q8NDW4 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF248Q8NDW4 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF248Q8NDW4 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF248Q8NDW4 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
ZNF248Q8NDW4 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF248Q8NDW4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF248Q8NDW4 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF248Q8NDW4 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF248Q8NDW4 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF248Q8NDW4 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.24■□□□□ 0.83
ZNF248Q8NDW4 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.24■□□□□ 0.83
ZNF248Q8NDW4 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.24■□□□□ 0.83
ZNF248Q8NDW4 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF248Q8NDW4 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.24■□□□□ 0.83
ZNF248Q8NDW4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.24■□□□□ 0.83
ZNF248Q8NDW4 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF248Q8NDW4 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF248Q8NDW4 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF248Q8NDW4 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
ZNF248Q8NDW4 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF248Q8NDW4 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF248Q8NDW4 AC055733.4-201ENST00000638462 1354 ntBASIC20.23■□□□□ 0.83
ZNF248Q8NDW4 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF248Q8NDW4 ESRRAP1-201ENST00000400596 1257 ntBASIC20.23■□□□□ 0.83
ZNF248Q8NDW4 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
ZNF248Q8NDW4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.23■□□□□ 0.83
ZNF248Q8NDW4 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF248Q8NDW4 AC007322.4-201ENST00000509611 723 ntBASIC20.23■□□□□ 0.83
ZNF248Q8NDW4 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.23■□□□□ 0.83
ZNF248Q8NDW4 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.23■□□□□ 0.83
ZNF248Q8NDW4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF248Q8NDW4 AC069236.1-201ENST00000604339 616 ntBASIC20.23■□□□□ 0.83
ZNF248Q8NDW4 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF248Q8NDW4 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.23■□□□□ 0.83
ZNF248Q8NDW4 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF248Q8NDW4 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF248Q8NDW4 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF248Q8NDW4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF248Q8NDW4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.22■□□□□ 0.83
ZNF248Q8NDW4 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.22■□□□□ 0.83
ZNF248Q8NDW4 AL512625.2-201ENST00000417533 625 ntBASIC20.22■□□□□ 0.83
ZNF248Q8NDW4 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.22■□□□□ 0.83
ZNF248Q8NDW4 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF248Q8NDW4 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.22■□□□□ 0.83
ZNF248Q8NDW4 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.22■□□□□ 0.83
ZNF248Q8NDW4 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.22■□□□□ 0.83
ZNF248Q8NDW4 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
ZNF248Q8NDW4 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.22■□□□□ 0.83
ZNF248Q8NDW4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.22■□□□□ 0.83
ZNF248Q8NDW4 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF248Q8NDW4 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF248Q8NDW4 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF248Q8NDW4 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF248Q8NDW4 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF248Q8NDW4 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
ZNF248Q8NDW4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.21■□□□□ 0.83
ZNF248Q8NDW4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.21■□□□□ 0.83
ZNF248Q8NDW4 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF248Q8NDW4 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF248Q8NDW4 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.21■□□□□ 0.83
ZNF248Q8NDW4 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF248Q8NDW4 DUSP8P3-201ENST00000399571 1760 ntBASIC20.21■□□□□ 0.83
ZNF248Q8NDW4 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF248Q8NDW4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF248Q8NDW4 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.2■□□□□ 0.82
ZNF248Q8NDW4 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms