Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC33.48■■■□□ 2.95
CFAP43Q8NDM7 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC33.48■■■□□ 2.95
CFAP43Q8NDM7 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC33.48■■■□□ 2.95
CFAP43Q8NDM7 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC33.48■■■□□ 2.95
CFAP43Q8NDM7 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
CFAP43Q8NDM7 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC33.48■■■□□ 2.95
CFAP43Q8NDM7 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC33.48■■■□□ 2.95
CFAP43Q8NDM7 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC33.48■■■□□ 2.95
CFAP43Q8NDM7 ESRRAP1-201ENST00000400596 1257 ntBASIC33.48■■■□□ 2.95
CFAP43Q8NDM7 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC33.48■■■□□ 2.95
CFAP43Q8NDM7 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC33.48■■■□□ 2.95
CFAP43Q8NDM7 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC33.47■■■□□ 2.95
CFAP43Q8NDM7 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
CFAP43Q8NDM7 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC33.47■■■□□ 2.95
CFAP43Q8NDM7 RPS2P4-201ENST00000476944 856 ntBASIC33.47■■■□□ 2.95
CFAP43Q8NDM7 PLLP-204ENST00000569059 665 ntTSL 3 BASIC33.47■■■□□ 2.95
CFAP43Q8NDM7 MMD2-204ENST00000612910 778 ntTSL 5 BASIC33.47■■■□□ 2.95
CFAP43Q8NDM7 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
CFAP43Q8NDM7 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC33.47■■■□□ 2.95
CFAP43Q8NDM7 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC33.47■■■□□ 2.95
CFAP43Q8NDM7 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC33.47■■■□□ 2.95
CFAP43Q8NDM7 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC33.46■■■□□ 2.95
CFAP43Q8NDM7 AC127496.7-201ENST00000625110 1798 ntBASIC33.46■■■□□ 2.95
CFAP43Q8NDM7 BAALC-201ENST00000297574 801 ntTSL 3 BASIC33.46■■■□□ 2.95
CFAP43Q8NDM7 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
CFAP43Q8NDM7 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC33.46■■■□□ 2.95
CFAP43Q8NDM7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC33.46■■■□□ 2.95
CFAP43Q8NDM7 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC33.46■■■□□ 2.95
CFAP43Q8NDM7 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC33.45■■■□□ 2.95
CFAP43Q8NDM7 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC33.45■■■□□ 2.95
CFAP43Q8NDM7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC33.45■■■□□ 2.95
CFAP43Q8NDM7 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC33.45■■■□□ 2.95
CFAP43Q8NDM7 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.95
CFAP43Q8NDM7 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC33.45■■■□□ 2.95
CFAP43Q8NDM7 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC33.45■■■□□ 2.94
CFAP43Q8NDM7 FXN-202ENST00000396364 980 ntTSL 5 BASIC33.45■■■□□ 2.94
CFAP43Q8NDM7 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC33.45■■■□□ 2.94
CFAP43Q8NDM7 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC33.44■■■□□ 2.94
CFAP43Q8NDM7 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC33.44■■■□□ 2.94
CFAP43Q8NDM7 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC33.44■■■□□ 2.94
CFAP43Q8NDM7 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC33.44■■■□□ 2.94
CFAP43Q8NDM7 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC33.44■■■□□ 2.94
CFAP43Q8NDM7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC33.44■■■□□ 2.94
CFAP43Q8NDM7 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC33.44■■■□□ 2.94
CFAP43Q8NDM7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC33.44■■■□□ 2.94
CFAP43Q8NDM7 AL512625.2-201ENST00000417533 625 ntBASIC33.44■■■□□ 2.94
CFAP43Q8NDM7 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC33.44■■■□□ 2.94
CFAP43Q8NDM7 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC33.44■■■□□ 2.94
CFAP43Q8NDM7 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC33.44■■■□□ 2.94
CFAP43Q8NDM7 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC33.43■■■□□ 2.94
CFAP43Q8NDM7 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC33.43■■■□□ 2.94
CFAP43Q8NDM7 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
CFAP43Q8NDM7 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC33.43■■■□□ 2.94
CFAP43Q8NDM7 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
CFAP43Q8NDM7 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC33.43■■■□□ 2.94
CFAP43Q8NDM7 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
CFAP43Q8NDM7 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
CFAP43Q8NDM7 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC33.42■■■□□ 2.94
CFAP43Q8NDM7 BMP1-204ENST00000397814 836 ntTSL 4 BASIC33.42■■■□□ 2.94
CFAP43Q8NDM7 BX276092.2-201ENST00000417668 665 ntBASIC33.42■■■□□ 2.94
CFAP43Q8NDM7 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC33.42■■■□□ 2.94
CFAP43Q8NDM7 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC33.42■■■□□ 2.94
CFAP43Q8NDM7 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC33.42■■■□□ 2.94
CFAP43Q8NDM7 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
CFAP43Q8NDM7 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
CFAP43Q8NDM7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
CFAP43Q8NDM7 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
CFAP43Q8NDM7 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC33.42■■■□□ 2.94
CFAP43Q8NDM7 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
CFAP43Q8NDM7 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC33.41■■■□□ 2.94
CFAP43Q8NDM7 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
CFAP43Q8NDM7 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC33.41■■■□□ 2.94
CFAP43Q8NDM7 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC33.41■■■□□ 2.94
CFAP43Q8NDM7 TERF1P5-201ENST00000477545 1207 ntBASIC33.41■■■□□ 2.94
CFAP43Q8NDM7 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC33.41■■■□□ 2.94
CFAP43Q8NDM7 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC33.41■■■□□ 2.94
CFAP43Q8NDM7 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC33.41■■■□□ 2.94
CFAP43Q8NDM7 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
CFAP43Q8NDM7 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC33.41■■■□□ 2.94
CFAP43Q8NDM7 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC33.4■■■□□ 2.94
CFAP43Q8NDM7 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC33.4■■■□□ 2.94
CFAP43Q8NDM7 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC33.4■■■□□ 2.94
CFAP43Q8NDM7 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
CFAP43Q8NDM7 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC33.4■■■□□ 2.94
CFAP43Q8NDM7 AC091874.3-201ENST00000512672 1195 ntBASIC33.4■■■□□ 2.94
CFAP43Q8NDM7 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC33.4■■■□□ 2.94
CFAP43Q8NDM7 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC33.4■■■□□ 2.94
CFAP43Q8NDM7 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
CFAP43Q8NDM7 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC33.4■■■□□ 2.94
CFAP43Q8NDM7 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC33.4■■■□□ 2.94
CFAP43Q8NDM7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC33.4■■■□□ 2.94
CFAP43Q8NDM7 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC33.39■■■□□ 2.94
CFAP43Q8NDM7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC33.39■■■□□ 2.94
CFAP43Q8NDM7 AC128676.1-201ENST00000454392 318 ntBASIC33.39■■■□□ 2.94
CFAP43Q8NDM7 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC33.39■■■□□ 2.94
CFAP43Q8NDM7 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC33.39■■■□□ 2.94
CFAP43Q8NDM7 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC33.39■■■□□ 2.94
CFAP43Q8NDM7 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC33.39■■■□□ 2.94
CFAP43Q8NDM7 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC33.39■■■□□ 2.94
CFAP43Q8NDM7 INO80E-214ENST00000620599 515 ntTSL 2 BASIC33.39■■■□□ 2.94
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms