Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.83■□□□□ 0.6
CNEP1R1Q8N9A8 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CNEP1R1Q8N9A8 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CNEP1R1Q8N9A8 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.83■□□□□ 0.6
CNEP1R1Q8N9A8 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.83■□□□□ 0.6
CNEP1R1Q8N9A8 AC127496.7-201ENST00000625110 1798 ntBASIC18.83■□□□□ 0.6
CNEP1R1Q8N9A8 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CNEP1R1Q8N9A8 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CNEP1R1Q8N9A8 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.82■□□□□ 0.6
CNEP1R1Q8N9A8 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CNEP1R1Q8N9A8 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNEP1R1Q8N9A8 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNEP1R1Q8N9A8 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.82■□□□□ 0.6
CNEP1R1Q8N9A8 AC092053.2-201ENST00000640557 1818 ntBASIC18.82■□□□□ 0.6
CNEP1R1Q8N9A8 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CNEP1R1Q8N9A8 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CNEP1R1Q8N9A8 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.82■□□□□ 0.6
CNEP1R1Q8N9A8 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.82■□□□□ 0.6
CNEP1R1Q8N9A8 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.82■□□□□ 0.6
CNEP1R1Q8N9A8 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CNEP1R1Q8N9A8 EEF1DP3-203ENST00000566025 782 ntBASIC18.82■□□□□ 0.6
CNEP1R1Q8N9A8 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CNEP1R1Q8N9A8 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.82■□□□□ 0.6
CNEP1R1Q8N9A8 AC053503.5-201ENST00000601508 636 ntBASIC18.82■□□□□ 0.6
CNEP1R1Q8N9A8 RAP2CP1-201ENST00000605103 478 ntBASIC18.82■□□□□ 0.6
CNEP1R1Q8N9A8 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
CNEP1R1Q8N9A8 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNEP1R1Q8N9A8 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.82■□□□□ 0.6
CNEP1R1Q8N9A8 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNEP1R1Q8N9A8 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.82■□□□□ 0.6
CNEP1R1Q8N9A8 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNEP1R1Q8N9A8 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CNEP1R1Q8N9A8 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNEP1R1Q8N9A8 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.81■□□□□ 0.6
CNEP1R1Q8N9A8 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.81■□□□□ 0.6
CNEP1R1Q8N9A8 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CNEP1R1Q8N9A8 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNEP1R1Q8N9A8 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.81■□□□□ 0.6
CNEP1R1Q8N9A8 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNEP1R1Q8N9A8 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNEP1R1Q8N9A8 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.81■□□□□ 0.6
CNEP1R1Q8N9A8 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNEP1R1Q8N9A8 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNEP1R1Q8N9A8 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNEP1R1Q8N9A8 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNEP1R1Q8N9A8 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.81■□□□□ 0.6
CNEP1R1Q8N9A8 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CNEP1R1Q8N9A8 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.81■□□□□ 0.6
CNEP1R1Q8N9A8 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNEP1R1Q8N9A8 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNEP1R1Q8N9A8 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.81■□□□□ 0.6
CNEP1R1Q8N9A8 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNEP1R1Q8N9A8 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNEP1R1Q8N9A8 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.81■□□□□ 0.6
CNEP1R1Q8N9A8 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNEP1R1Q8N9A8 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNEP1R1Q8N9A8 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNEP1R1Q8N9A8 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CNEP1R1Q8N9A8 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CNEP1R1Q8N9A8 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
CNEP1R1Q8N9A8 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
CNEP1R1Q8N9A8 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CNEP1R1Q8N9A8 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CNEP1R1Q8N9A8 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
CNEP1R1Q8N9A8 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.8■□□□□ 0.6
CNEP1R1Q8N9A8 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CNEP1R1Q8N9A8 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CNEP1R1Q8N9A8 MIR663A-201ENST00000385250 93 ntBASIC18.8■□□□□ 0.6
CNEP1R1Q8N9A8 HLA-L-209ENST00000420110 1011 ntBASIC18.8■□□□□ 0.6
CNEP1R1Q8N9A8 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CNEP1R1Q8N9A8 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CNEP1R1Q8N9A8 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.8■□□□□ 0.6
CNEP1R1Q8N9A8 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.8■□□□□ 0.6
CNEP1R1Q8N9A8 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CNEP1R1Q8N9A8 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.8■□□□□ 0.6
CNEP1R1Q8N9A8 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CNEP1R1Q8N9A8 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CNEP1R1Q8N9A8 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNEP1R1Q8N9A8 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNEP1R1Q8N9A8 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNEP1R1Q8N9A8 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CNEP1R1Q8N9A8 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNEP1R1Q8N9A8 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNEP1R1Q8N9A8 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.79■□□□□ 0.6
CNEP1R1Q8N9A8 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNEP1R1Q8N9A8 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.79■□□□□ 0.6
CNEP1R1Q8N9A8 KRT18P20-201ENST00000548986 1279 ntBASIC18.79■□□□□ 0.6
CNEP1R1Q8N9A8 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.79■□□□□ 0.6
CNEP1R1Q8N9A8 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.79■□□□□ 0.6
CNEP1R1Q8N9A8 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.79■□□□□ 0.6
CNEP1R1Q8N9A8 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CNEP1R1Q8N9A8 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CNEP1R1Q8N9A8 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNEP1R1Q8N9A8 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNEP1R1Q8N9A8 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNEP1R1Q8N9A8 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CNEP1R1Q8N9A8 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.78■□□□□ 0.6
CNEP1R1Q8N9A8 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CNEP1R1Q8N9A8 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CNEP1R1Q8N9A8 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms