Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CPSF7Q8N684 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.67■□□□□ 0.9
CPSF7Q8N684 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
CPSF7Q8N684 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.67■□□□□ 0.9
CPSF7Q8N684 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CPSF7Q8N684 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CPSF7Q8N684 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CPSF7Q8N684 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CPSF7Q8N684 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CPSF7Q8N684 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CPSF7Q8N684 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CPSF7Q8N684 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CPSF7Q8N684 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.66■□□□□ 0.9
CPSF7Q8N684 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.66■□□□□ 0.9
CPSF7Q8N684 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.66■□□□□ 0.9
CPSF7Q8N684 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CPSF7Q8N684 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CPSF7Q8N684 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CPSF7Q8N684 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CPSF7Q8N684 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CPSF7Q8N684 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CPSF7Q8N684 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CPSF7Q8N684 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CPSF7Q8N684 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CPSF7Q8N684 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
CPSF7Q8N684 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CPSF7Q8N684 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CPSF7Q8N684 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CPSF7Q8N684 AC092667.1-201ENST00000434301 2586 ntBASIC20.65■□□□□ 0.9
CPSF7Q8N684 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CPSF7Q8N684 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CPSF7Q8N684 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CPSF7Q8N684 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CPSF7Q8N684 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CPSF7Q8N684 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.65■□□□□ 0.9
CPSF7Q8N684 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.65■□□□□ 0.9
CPSF7Q8N684 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.65■□□□□ 0.9
CPSF7Q8N684 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CPSF7Q8N684 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.65■□□□□ 0.9
CPSF7Q8N684 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CPSF7Q8N684 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.65■□□□□ 0.9
CPSF7Q8N684 MIR4767-201ENST00000582827 78 ntBASIC20.65■□□□□ 0.9
CPSF7Q8N684 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.65■□□□□ 0.9
CPSF7Q8N684 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CPSF7Q8N684 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
CPSF7Q8N684 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CPSF7Q8N684 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.64■□□□□ 0.9
CPSF7Q8N684 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CPSF7Q8N684 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CPSF7Q8N684 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.64■□□□□ 0.9
CPSF7Q8N684 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CPSF7Q8N684 OR7E47P-201ENST00000546390 1422 ntBASIC20.64■□□□□ 0.89
CPSF7Q8N684 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CPSF7Q8N684 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.64■□□□□ 0.89
CPSF7Q8N684 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.64■□□□□ 0.89
CPSF7Q8N684 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CPSF7Q8N684 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CPSF7Q8N684 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CPSF7Q8N684 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CPSF7Q8N684 AF213884.3-201ENST00000563833 479 ntBASIC20.64■□□□□ 0.89
CPSF7Q8N684 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CPSF7Q8N684 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.64■□□□□ 0.89
CPSF7Q8N684 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CPSF7Q8N684 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CPSF7Q8N684 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CPSF7Q8N684 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.63■□□□□ 0.89
CPSF7Q8N684 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPSF7Q8N684 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPSF7Q8N684 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.63■□□□□ 0.89
CPSF7Q8N684 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPSF7Q8N684 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPSF7Q8N684 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPSF7Q8N684 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPSF7Q8N684 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.63■□□□□ 0.89
CPSF7Q8N684 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CPSF7Q8N684 LINC01006-201ENST00000333319 2292 ntBASIC20.63■□□□□ 0.89
CPSF7Q8N684 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPSF7Q8N684 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.63■□□□□ 0.89
CPSF7Q8N684 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPSF7Q8N684 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.63■□□□□ 0.89
CPSF7Q8N684 FEM1AP1-201ENST00000431297 1995 ntBASIC20.63■□□□□ 0.89
CPSF7Q8N684 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPSF7Q8N684 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.62■□□□□ 0.89
CPSF7Q8N684 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPSF7Q8N684 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPSF7Q8N684 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CPSF7Q8N684 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CPSF7Q8N684 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPSF7Q8N684 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CPSF7Q8N684 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.62■□□□□ 0.89
CPSF7Q8N684 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.62■□□□□ 0.89
CPSF7Q8N684 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CPSF7Q8N684 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.62■□□□□ 0.89
CPSF7Q8N684 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
CPSF7Q8N684 AL136967.2-201ENST00000623968 743 ntBASIC20.62■□□□□ 0.89
CPSF7Q8N684 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPSF7Q8N684 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CPSF7Q8N684 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.62■□□□□ 0.89
CPSF7Q8N684 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPSF7Q8N684 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms