Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.19■□□□□ 0.66
RP1L1Q8IWN7 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RP1L1Q8IWN7 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.19■□□□□ 0.66
RP1L1Q8IWN7 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
RP1L1Q8IWN7 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RP1L1Q8IWN7 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RP1L1Q8IWN7 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RP1L1Q8IWN7 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RP1L1Q8IWN7 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RP1L1Q8IWN7 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RP1L1Q8IWN7 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RP1L1Q8IWN7 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RP1L1Q8IWN7 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RP1L1Q8IWN7 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RP1L1Q8IWN7 TERF1P5-201ENST00000477545 1207 ntBASIC19.18■□□□□ 0.66
RP1L1Q8IWN7 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.18■□□□□ 0.66
RP1L1Q8IWN7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
RP1L1Q8IWN7 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RP1L1Q8IWN7 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RP1L1Q8IWN7 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.18■□□□□ 0.66
RP1L1Q8IWN7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
RP1L1Q8IWN7 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.17■□□□□ 0.66
RP1L1Q8IWN7 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.17■□□□□ 0.66
RP1L1Q8IWN7 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RP1L1Q8IWN7 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.17■□□□□ 0.66
RP1L1Q8IWN7 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RP1L1Q8IWN7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RP1L1Q8IWN7 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RP1L1Q8IWN7 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.17■□□□□ 0.66
RP1L1Q8IWN7 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RP1L1Q8IWN7 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.17■□□□□ 0.66
RP1L1Q8IWN7 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RP1L1Q8IWN7 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
RP1L1Q8IWN7 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RP1L1Q8IWN7 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
RP1L1Q8IWN7 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RP1L1Q8IWN7 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RP1L1Q8IWN7 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RP1L1Q8IWN7 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RP1L1Q8IWN7 ECEL1P3-201ENST00000427961 737 ntBASIC19.16■□□□□ 0.66
RP1L1Q8IWN7 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RP1L1Q8IWN7 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.16■□□□□ 0.66
RP1L1Q8IWN7 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.16■□□□□ 0.66
RP1L1Q8IWN7 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.16■□□□□ 0.66
RP1L1Q8IWN7 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RP1L1Q8IWN7 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RP1L1Q8IWN7 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RP1L1Q8IWN7 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RP1L1Q8IWN7 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RP1L1Q8IWN7 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RP1L1Q8IWN7 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RP1L1Q8IWN7 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RP1L1Q8IWN7 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.15■□□□□ 0.66
RP1L1Q8IWN7 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.15■□□□□ 0.66
RP1L1Q8IWN7 AC211429.1-201ENST00000415277 523 ntBASIC19.15■□□□□ 0.66
RP1L1Q8IWN7 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RP1L1Q8IWN7 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.15■□□□□ 0.66
RP1L1Q8IWN7 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RP1L1Q8IWN7 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
RP1L1Q8IWN7 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RP1L1Q8IWN7 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RP1L1Q8IWN7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RP1L1Q8IWN7 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RP1L1Q8IWN7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.15■□□□□ 0.66
RP1L1Q8IWN7 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RP1L1Q8IWN7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RP1L1Q8IWN7 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RP1L1Q8IWN7 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.15■□□□□ 0.66
RP1L1Q8IWN7 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RP1L1Q8IWN7 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RP1L1Q8IWN7 OR7E47P-201ENST00000546390 1422 ntBASIC19.15■□□□□ 0.66
RP1L1Q8IWN7 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RP1L1Q8IWN7 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RP1L1Q8IWN7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
RP1L1Q8IWN7 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RP1L1Q8IWN7 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
RP1L1Q8IWN7 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RP1L1Q8IWN7 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
RP1L1Q8IWN7 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RP1L1Q8IWN7 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
RP1L1Q8IWN7 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RP1L1Q8IWN7 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RP1L1Q8IWN7 MIR718-201ENST00000390190 70 ntBASIC19.14■□□□□ 0.65
RP1L1Q8IWN7 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
RP1L1Q8IWN7 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.14■□□□□ 0.65
RP1L1Q8IWN7 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.14■□□□□ 0.65
RP1L1Q8IWN7 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.14■□□□□ 0.65
RP1L1Q8IWN7 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RP1L1Q8IWN7 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RP1L1Q8IWN7 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RP1L1Q8IWN7 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RP1L1Q8IWN7 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RP1L1Q8IWN7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.13■□□□□ 0.65
RP1L1Q8IWN7 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.13■□□□□ 0.65
RP1L1Q8IWN7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
RP1L1Q8IWN7 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.13■□□□□ 0.65
RP1L1Q8IWN7 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.13■□□□□ 0.65
RP1L1Q8IWN7 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.13■□□□□ 0.65
RP1L1Q8IWN7 AP003097.1-201ENST00000530657 1135 ntBASIC19.13■□□□□ 0.65
RP1L1Q8IWN7 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms