Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.08■□□□□ 0.97
ZC3HC1Q86WB0 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ZC3HC1Q86WB0 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZC3HC1Q86WB0 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZC3HC1Q86WB0 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZC3HC1Q86WB0 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
ZC3HC1Q86WB0 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.08■□□□□ 0.97
ZC3HC1Q86WB0 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.08■□□□□ 0.97
ZC3HC1Q86WB0 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.08■□□□□ 0.97
ZC3HC1Q86WB0 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
ZC3HC1Q86WB0 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ZC3HC1Q86WB0 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.08■□□□□ 0.97
ZC3HC1Q86WB0 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
ZC3HC1Q86WB0 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ZC3HC1Q86WB0 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
ZC3HC1Q86WB0 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.07■□□□□ 0.96
ZC3HC1Q86WB0 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.07■□□□□ 0.96
ZC3HC1Q86WB0 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ZC3HC1Q86WB0 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZC3HC1Q86WB0 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZC3HC1Q86WB0 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.07■□□□□ 0.96
ZC3HC1Q86WB0 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
ZC3HC1Q86WB0 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.07■□□□□ 0.96
ZC3HC1Q86WB0 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.07■□□□□ 0.96
ZC3HC1Q86WB0 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.07■□□□□ 0.96
ZC3HC1Q86WB0 AC008764.7-201ENST00000593779 1081 ntBASIC21.07■□□□□ 0.96
ZC3HC1Q86WB0 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.07■□□□□ 0.96
ZC3HC1Q86WB0 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
ZC3HC1Q86WB0 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
ZC3HC1Q86WB0 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.07■□□□□ 0.96
ZC3HC1Q86WB0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.07■□□□□ 0.96
ZC3HC1Q86WB0 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ZC3HC1Q86WB0 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZC3HC1Q86WB0 AL049796.1-201ENST00000565336 1766 ntBASIC21.07■□□□□ 0.96
ZC3HC1Q86WB0 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
ZC3HC1Q86WB0 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
ZC3HC1Q86WB0 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ZC3HC1Q86WB0 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ZC3HC1Q86WB0 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ZC3HC1Q86WB0 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.06■□□□□ 0.96
ZC3HC1Q86WB0 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZC3HC1Q86WB0 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZC3HC1Q86WB0 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZC3HC1Q86WB0 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.06■□□□□ 0.96
ZC3HC1Q86WB0 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZC3HC1Q86WB0 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.06■□□□□ 0.96
ZC3HC1Q86WB0 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.06■□□□□ 0.96
ZC3HC1Q86WB0 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.06■□□□□ 0.96
ZC3HC1Q86WB0 AC096631.2-201ENST00000436136 790 ntBASIC21.06■□□□□ 0.96
ZC3HC1Q86WB0 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.06■□□□□ 0.96
ZC3HC1Q86WB0 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.06■□□□□ 0.96
ZC3HC1Q86WB0 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZC3HC1Q86WB0 AC008406.3-201ENST00000620001 1374 ntBASIC21.06■□□□□ 0.96
ZC3HC1Q86WB0 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZC3HC1Q86WB0 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.06■□□□□ 0.96
ZC3HC1Q86WB0 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZC3HC1Q86WB0 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ZC3HC1Q86WB0 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZC3HC1Q86WB0 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZC3HC1Q86WB0 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZC3HC1Q86WB0 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ZC3HC1Q86WB0 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
ZC3HC1Q86WB0 AC099791.1-201ENST00000416440 715 ntBASIC21.05■□□□□ 0.96
ZC3HC1Q86WB0 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.05■□□□□ 0.96
ZC3HC1Q86WB0 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
ZC3HC1Q86WB0 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ZC3HC1Q86WB0 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.05■□□□□ 0.96
ZC3HC1Q86WB0 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.05■□□□□ 0.96
ZC3HC1Q86WB0 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.05■□□□□ 0.96
ZC3HC1Q86WB0 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.05■□□□□ 0.96
ZC3HC1Q86WB0 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.05■□□□□ 0.96
ZC3HC1Q86WB0 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZC3HC1Q86WB0 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZC3HC1Q86WB0 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ZC3HC1Q86WB0 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZC3HC1Q86WB0 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZC3HC1Q86WB0 PBX2P1-201ENST00000493219 1291 ntBASIC21.04■□□□□ 0.96
ZC3HC1Q86WB0 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ZC3HC1Q86WB0 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.04■□□□□ 0.96
ZC3HC1Q86WB0 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZC3HC1Q86WB0 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZC3HC1Q86WB0 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZC3HC1Q86WB0 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ZC3HC1Q86WB0 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZC3HC1Q86WB0 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.03■□□□□ 0.96
ZC3HC1Q86WB0 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.03■□□□□ 0.96
ZC3HC1Q86WB0 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZC3HC1Q86WB0 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.03■□□□□ 0.96
ZC3HC1Q86WB0 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.03■□□□□ 0.96
ZC3HC1Q86WB0 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
ZC3HC1Q86WB0 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.03■□□□□ 0.96
ZC3HC1Q86WB0 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
ZC3HC1Q86WB0 AC027682.1-201ENST00000562846 899 ntBASIC21.03■□□□□ 0.96
ZC3HC1Q86WB0 AC106739.1-201ENST00000617035 715 ntBASIC21.03■□□□□ 0.96
ZC3HC1Q86WB0 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZC3HC1Q86WB0 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZC3HC1Q86WB0 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZC3HC1Q86WB0 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
ZC3HC1Q86WB0 AC009237.3-201ENST00000393279 1427 ntBASIC21.03■□□□□ 0.96
ZC3HC1Q86WB0 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms