Protein–RNA interactions for Protein: Q7Z4K8

TRIM46, Tripartite motif-containing protein 46, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46Q7Z4K8 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM46Q7Z4K8 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM46Q7Z4K8 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM46Q7Z4K8 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.34■□□□□ 0.85
TRIM46Q7Z4K8 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM46Q7Z4K8 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.33■□□□□ 0.85
TRIM46Q7Z4K8 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM46Q7Z4K8 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM46Q7Z4K8 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.33■□□□□ 0.85
TRIM46Q7Z4K8 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
TRIM46Q7Z4K8 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.33■□□□□ 0.84
TRIM46Q7Z4K8 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRIM46Q7Z4K8 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRIM46Q7Z4K8 AC009237.3-201ENST00000393279 1427 ntBASIC20.33■□□□□ 0.84
TRIM46Q7Z4K8 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.33■□□□□ 0.84
TRIM46Q7Z4K8 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRIM46Q7Z4K8 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.33■□□□□ 0.84
TRIM46Q7Z4K8 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRIM46Q7Z4K8 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRIM46Q7Z4K8 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM46Q7Z4K8 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.32■□□□□ 0.84
TRIM46Q7Z4K8 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM46Q7Z4K8 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM46Q7Z4K8 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.32■□□□□ 0.84
TRIM46Q7Z4K8 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.32■□□□□ 0.84
TRIM46Q7Z4K8 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.32■□□□□ 0.84
TRIM46Q7Z4K8 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.32■□□□□ 0.84
TRIM46Q7Z4K8 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.32■□□□□ 0.84
TRIM46Q7Z4K8 AC008764.7-201ENST00000593779 1081 ntBASIC20.32■□□□□ 0.84
TRIM46Q7Z4K8 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.32■□□□□ 0.84
TRIM46Q7Z4K8 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM46Q7Z4K8 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM46Q7Z4K8 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM46Q7Z4K8 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM46Q7Z4K8 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM46Q7Z4K8 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM46Q7Z4K8 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.31■□□□□ 0.84
TRIM46Q7Z4K8 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.31■□□□□ 0.84
TRIM46Q7Z4K8 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM46Q7Z4K8 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM46Q7Z4K8 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM46Q7Z4K8 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
TRIM46Q7Z4K8 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM46Q7Z4K8 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM46Q7Z4K8 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.31■□□□□ 0.84
TRIM46Q7Z4K8 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM46Q7Z4K8 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM46Q7Z4K8 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.31■□□□□ 0.84
TRIM46Q7Z4K8 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.31■□□□□ 0.84
TRIM46Q7Z4K8 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM46Q7Z4K8 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM46Q7Z4K8 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
TRIM46Q7Z4K8 AC008406.3-201ENST00000620001 1374 ntBASIC20.31■□□□□ 0.84
TRIM46Q7Z4K8 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
TRIM46Q7Z4K8 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM46Q7Z4K8 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM46Q7Z4K8 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM46Q7Z4K8 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM46Q7Z4K8 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM46Q7Z4K8 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM46Q7Z4K8 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM46Q7Z4K8 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.3■□□□□ 0.84
TRIM46Q7Z4K8 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM46Q7Z4K8 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.3■□□□□ 0.84
TRIM46Q7Z4K8 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
TRIM46Q7Z4K8 AC099791.1-201ENST00000416440 715 ntBASIC20.3■□□□□ 0.84
TRIM46Q7Z4K8 AC096631.2-201ENST00000436136 790 ntBASIC20.3■□□□□ 0.84
TRIM46Q7Z4K8 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
TRIM46Q7Z4K8 AC027682.1-201ENST00000562846 899 ntBASIC20.3■□□□□ 0.84
TRIM46Q7Z4K8 AC106739.1-201ENST00000617035 715 ntBASIC20.3■□□□□ 0.84
TRIM46Q7Z4K8 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
TRIM46Q7Z4K8 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
TRIM46Q7Z4K8 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.3■□□□□ 0.84
TRIM46Q7Z4K8 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM46Q7Z4K8 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM46Q7Z4K8 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.3■□□□□ 0.84
TRIM46Q7Z4K8 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM46Q7Z4K8 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM46Q7Z4K8 AC055733.4-201ENST00000638462 1354 ntBASIC20.3■□□□□ 0.84
TRIM46Q7Z4K8 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM46Q7Z4K8 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.29■□□□□ 0.84
TRIM46Q7Z4K8 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.29■□□□□ 0.84
TRIM46Q7Z4K8 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM46Q7Z4K8 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
TRIM46Q7Z4K8 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.29■□□□□ 0.84
TRIM46Q7Z4K8 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.29■□□□□ 0.84
TRIM46Q7Z4K8 PBX2P1-201ENST00000493219 1291 ntBASIC20.29■□□□□ 0.84
TRIM46Q7Z4K8 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM46Q7Z4K8 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
TRIM46Q7Z4K8 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
TRIM46Q7Z4K8 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM46Q7Z4K8 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM46Q7Z4K8 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM46Q7Z4K8 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM46Q7Z4K8 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM46Q7Z4K8 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.28■□□□□ 0.84
TRIM46Q7Z4K8 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
TRIM46Q7Z4K8 EDA-201ENST00000338901 1233 ntBASIC20.28■□□□□ 0.84
TRIM46Q7Z4K8 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM46Q7Z4K8 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms